Gene Information

Name : STH1880 (STH1880)
Accession : YP_075709.1
Strain : Symbiobacterium thermophilum IAM 14863
Genome accession: NC_006177
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2021161 - 2021913 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
GTGCGGAACGTCAGCTTCGGTTACGGTAAGGATCTGGTGCTGGACCGTGTCAGCCTGACGGTGGGGCGCGGGGAGTACCT
GGGGCTGATCGGCCCCAACGGTTCCGGCAAGACCACCCTGCTCCGCCTGATCCTCGGGCTGCTGCCCCTCACGCAGGGCG
AAATCCGCCTCTTCGGCACGCCCGTACAGCAGTTCCGGGAGCGCTGGCGGGTGGGCTACGTCGCCCAGAAGGCCGCCTCC
TTCAACTCCGCCTTTCCCGCCACGGTGGAGGAGGTGGTCAGCACAGGCCTGACGGCCCGGCGCGGCCTCTTCCGGCGGTT
CACGGCGTCGGACCGGCTGGCCGTGCGCCAAGCCCTGGACCGGGTCGGGCTCCTCCCGTACAAGGACCGGCTGGTGGGCC
GGCTCTCGGGTGGGCAGCAGCAGCGGGTGTTCATCGCCCGGGCCCTGGTCAGCCGGCCGGAGCTTCTGATCCTGGACGAG
CCCACGGTGGGTGTTGACGCCTCCGCGGAGGGGCAGTTCTACCGGCTGATCCGCCGCCTGCGGGAGGAGATGGGGCTGAC
GGTGATCCTCGTCTCCCACGACATCGGCGCGATCACCCACGAGGTCTCGGCCCTGGCCTGCCTGAACCGCCGGCTGTTCT
ACCACGGCTCGCCGGCGGACTTCGGCACCGAGGAGCAGCTGTGCGAACTCTACGGTCACGATGTCCTGCGCATCCACCAT
CACCACCACCGCGGGGAGGGAGACGGCCCGTGA

Protein sequence : 
MRNVSFGYGKDLVLDRVSLTVGRGEYLGLIGPNGSGKTTLLRLILGLLPLTQGEIRLFGTPVQQFRERWRVGYVAQKAAS
FNSAFPATVEEVVSTGLTARRGLFRRFTASDRLAVRQALDRVGLLPYKDRLVGRLSGGQQQRVFIARALVSRPELLILDE
PTVGVDASAEGQFYRLIRRLREEMGLTVILVSHDIGAITHEVSALACLNRRLFYHGSPADFGTEEQLCELYGHDVLRIHH
HHHRGEGDGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 1e-16 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 1e-16 41
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-16 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 1e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STH1880 YP_075709.1 ABC transporter ATP-binding protein BAC0400 Protein 5e-21 41