Gene Information

Name : STH1603 (STH1603)
Accession : YP_075432.1
Strain : Symbiobacterium thermophilum IAM 14863
Genome accession: NC_006177
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 1744330 - 1745109 bp
Length : 780 bp
Strand : +
Note : -

DNA sequence : 
ATGGTAAAGGTGAGGGGCGTTTCCAAGTCCTTCGGGCCGAAGCGGGTGCTGCACGACGTCTCGTTGGACATCGAAAAGGG
CAAGGTGACGACGCTCATCGGGCCCAACGGCGCGGGCAAGTCGACCCTGCTCTCGCTGATGTCGCGGCTCTTACCCAAGG
ACTCCGGCCAGATCCTGATCGACGGGCGGGAGATCGGCCAGTACAAGTCGGAGGAGCTGGCCCGCCGGCTGGCGATCCTG
AAGCAGACCCACCACCTGAACATCCGGCTGACGGTGCGGGAGCTGGTGGAGTTCGGCCGGTTCCCCTACAGCCACGGGCG
GCTGACCAGGGAGGACCGGGAAGTCGTCGACGAGGCTCTCCGCTACCTGGACCTCCACGAGATCGAAGGCAAGTACCTGG
ATCAGCTGAGCGGCGGCCAGCGGCAGCGGGCGTTCATCGCCATGGTGCTCGCCCAGGACACGGAGTACGTCCTGCTGGAC
GAGCCGCTGAACAACCTGGACATGAAGCACGCGGTCCAGATCATGCGCATCACGCGCAGTCTGGCGAACGACCTGGGCAA
GACGGTCGTGCTGGTCCTGCACGACGTGAACTTCGCCTCGGCCTACTCGGACCACATCGTCGCCCTGAAGGACGGACGGG
TGGCCGCCGCGGGGACGCCTGACGAGCTGATCCGTTCCGACGTGCTGGGCGACATCTACGAGATGAAGATTCCCATTGAG
ACTGTGGGCGGCTGCCGGGTGTGCATCTACTTCACCGGCGAGCAGGCCGCCGCCCTCTAG

Protein sequence : 
MVKVRGVSKSFGPKRVLHDVSLDIEKGKVTTLIGPNGAGKSTLLSLMSRLLPKDSGQILIDGREIGQYKSEELARRLAIL
KQTHHLNIRLTVRELVEFGRFPYSHGRLTREDREVVDEALRYLDLHEIEGKYLDQLSGGQRQRAFIAMVLAQDTEYVLLD
EPLNNLDMKHAVQIMRITRSLANDLGKTVVLVLHDVNFASAYSDHIVALKDGRVAAAGTPDELIRSDVLGDIYEMKIPIE
TVGGCRVCIYFTGEQAAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-43 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-39 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-39 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-39 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-39 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-38 41
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STH1603 YP_075432.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 7e-44 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STH1603 YP_075432.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 7e-44 45