Gene Information

Name : STH1424 (STH1424)
Accession : YP_075253.1
Strain : Symbiobacterium thermophilum IAM 14863
Genome accession: NC_006177
Putative virulence/resistance : Resistance
Product : oligopeptide ABC transporter permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 1571406 - 1572323 bp
Length : 918 bp
Strand : +
Note : -

DNA sequence : 
GTGAGGCCAGTGGCAGCGGCCCGTGAGCCGGACACCCGCCGCGAGGACGCCCGGACCGGGCGCAGGGTGCTGCGCCAGGC
GTTGCGGCAACTGTGGCGGCGGAAGGTGGCTCTCCTGGGGGTGCTCATGGTCCTGGGGGCGGTGATCTGCGCCCTGTTTG
CCCCCGTCCTGGCGCCGCACGACCCCAACGCCCAACAGGTTCAACTCCGGCTGCTGCCGCCCTTCTGGATGGAAGGCGCG
CACCCTGCATATCCCCTGGGCACGGACCACCTGGGTCGGGACATCCTGAGCCGGCTGATCTACGGGTCCCGGGTGTCGCT
CACCGTGGGGCTTTCGGCGGTGCTGATCGCAGGCGGCATCGGCACCGCGGCCGGGCTGGCGGCCGGGTACCTGGGCGGGG
CGGTGGACGACCTGGTGGGGCGGCTGGGCGACGTGCAGCTGGCCTTTCCGTTCACGCTGCTGGCCCTGGTGGTGATGGCT
GTCCTCGGCACGGGGATGGGCAAGACCATCGCCGTGCTCGGCATCACCGGCTGGGTCTTCTATGCCCGTGTGCTGCGCTC
CGAGGTGCTCGCCCTGCGGGAGCGGGACTTCATCCTGGCCTCGCGCGCCCTGGGAAACCCCGGGTGGCGGACCGTGCTCC
GGCACCTGTTCCCCAACGTCGCCGGCACGCTGATCGTGCTGGCGACGCTGGAGGTGCCCCGGGTGATCATCACCGAGTCG
GCCCTCACCTTCCTCGGGCTGGGCATCCAGCCGCCCACCGTCACCTGGGGCGGCATGCTGGCCGACGCCCGCAACTACAT
CACCACCCACTGGTGGGTGGCCACCTTCCCGGGTCTGGCGTTGCAGCTGACGGTGCTGGGGCTGAACCTGACGGGCGACT
TCCTGCGGGAGATCCTGGACCCGCGGCTGAACTCCTGA

Protein sequence : 
MRPVAAAREPDTRREDARTGRRVLRQALRQLWRRKVALLGVLMVLGAVICALFAPVLAPHDPNAQQVQLRLLPPFWMEGA
HPAYPLGTDHLGRDILSRLIYGSRVSLTVGLSAVLIAGGIGTAAGLAAGYLGGAVDDLVGRLGDVQLAFPFTLLALVVMA
VLGTGMGKTIAVLGITGWVFYARVLRSEVLALRERDFILASRALGNPGWRTVLRHLFPNVAGTLIVLATLEVPRVIITES
ALTFLGLGIQPPTVTWGGMLADARNYITTHWWVATFPGLALQLTVLGLNLTGDFLREILDPRLNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STH1424 YP_075253.1 oligopeptide ABC transporter permease BAC0272 Protein 2e-33 42