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Name : serS (STH10) Accession : YP_073839.1 Strain : Symbiobacterium thermophilum IAM 14863 Genome accession: NC_006177 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 12383 - 13648 bp Length : 1266 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTGGATTTGAGGTTCGTTCGCACCAATCCCGACGTCGTTCGTCAGGCGCTGATCAACAAGGGTGTTTCCGTCGACCT GGACCGCATCCTGGCCCTGGACGTGGAGAGGCGGCAGATTCTGGCCGAGGTCGAGCAGTTGAAAGCGCGCCGCAACCAAG TGTCCAAGCAGGTGGGCATCCTGAAGCAGCAGGGGCAGGACGTCAGCGCGATCATCGCGGAGATGGGCGCCATCGGCGAC CGCATCAAGGAGCTGGATGACCGGGAGCGGCAGGTGTCCGATGAGCTGCAGGACCTGCTTTACCAGCTGCCCAACCTCCC CGCGCCCGACGTGCCGGTCGGCCCGGACGAAACCGGCAACGTCGAGGTGAAGCGGTGGGGCGAGCCCCGCCAGTTCGCCT TCCCGGTGAAGCCTCACTGGGACCTGGGGGTGGCCATGGACGGCCTGGACTTCGAGCGGGCCGCCAAGGTCACCGGCAGC CGTTTCTCGTTCATCAAGGGCGGGCTGGCCCGGCTGCACCGCGCCCTGGTCAGCTTCTTCATCGACTACCTCACCGAGCG GGGCTACCGCGAGGTGCTGCCGCCCGTGATCATCAACACCGCCAGCTACTACGGCAGCGGCCAGTTCCCGAAGTTCAAGG AGGACGTCTTCAGCCTGGCCGGGACCGACTACCACCTTGCCTCCACCGCCGAAGTGCCGCTGGTCAACATGCACCGGGAC GAGATCCTGGACGAGGCCGTTCTGCCCCTGAGGTACGTGGGCTACAGCGGGTGTTTCCGCAGTGAGGCCGGCGCGGCCGG CCGCGACACCCGCGGCCTCATCCGGCAGCACTACTTCGAGAAGGTCGAGATGGTGCAGTTCACCCGGCCCGAGGAGAGCG AACAGGCCCTCATGGAGATCGTGGCCAACGCCGAGGGCATGCTGGAGCAACTCAACCTGCCGTACCGGCGCATGCTCATG TGCACGGGCGACATGGGCTTCGGGCAGTACAAGAAGTACGACATCGAGGTGTGGATGCCCAGCTACGAGCGGTACGTGGA GATCTCGTCCTGCTCCAACATGAGCGACTTCCAGGCCCGCCGCGCGAACATCCGCTACCGTCCTGCCGGAGGCAAGCCGG AGTTCGTGCACACGCTGAACGGCTCGGGCCTGGCCGTGGGCCGCACGCTCGCCGCGGTGATGGAGAACTACCAGAACGAG GACGGTTCCATCACGGTGCCGGAGGTGCTGCGGCCGTACACCCGGTGTGAGCGCATCGAACGATAA Protein sequence : MLDLRFVRTNPDVVRQALINKGVSVDLDRILALDVERRQILAEVEQLKARRNQVSKQVGILKQQGQDVSAIIAEMGAIGD RIKELDDRERQVSDELQDLLYQLPNLPAPDVPVGPDETGNVEVKRWGEPRQFAFPVKPHWDLGVAMDGLDFERAAKVTGS RFSFIKGGLARLHRALVSFFIDYLTERGYREVLPPVIINTASYYGSGQFPKFKEDVFSLAGTDYHLASTAEVPLVNMHRD EILDEAVLPLRYVGYSGCFRSEAGAAGRDTRGLIRQHYFEKVEMVQFTRPEESEQALMEIVANAEGMLEQLNLPYRRMLM CTGDMGFGQYKKYDIEVWMPSYERYVEISSCSNMSDFQARRANIRYRPAGGKPEFVHTLNGSGLAVGRTLAAVMENYQNE DGSITVPEVLRPYTRCERIER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-103 | 54 |
