|
Name : arsB (YPTB0785) Accession : YP_069326.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Resistance Product : arsenical efflux pump/H+ antiporter, arsB Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 943278 - 944567 bp Length : 1290 bp Strand : - Note : similar to Yersinia pestis YPO3347 arsB, arsF; arsenical pump membrane protein (99.7% evalue=0); Escherichia coli Z4904 arsB; arsenical pump membrane protein (83.9% evalue=0) DNA sequence : ATGTTGTTGGCTGGTGCTATTTTTATCCTGACTATCGTGTTAGTTATCTGGCAACCCAAAGGGTTAGGGATTGGTTGGAG TGCCATGCTGGGGGCAGGACTGGCATTACTCACTGGCGTGGTACATGTGAGTGATATTCCCGTGGTCTGGCAAATTGTCT GGAACGCCACGGCGACTTTTATCGCCATCATCATCATCAGCCTGTTATTGGATGAGTCGGGGTTCTTTGAATGGGCAGCC TTACATGTCGCACGGTGGGGTAATGGCCATGGTCGCCGCCTGTTTACTTACATCATCTTACTCGGCGCGGCAGTCGCTGC CCTGTTTGCCAATGATGGCGCGGCGCTGATCCTCACGCCGATTGTCATTGCCATGCTATTGGCGCTGGGGTTCGGCCGTG GCGCAACATTAGCCTTTGTGATGGCAGCCGGGTTTATTGCCGATACTGCCAGCTTGCCGCTTATCGTGTCGAACCTGGTG AATATAGTTTCTGCTGACTTCTTTAACCTCGGGTTCACTGAATACGCGGCGGTGATGGTGCCAGTCAATCTGGTCGCCGT TATCGCCACGCTGGCGATGCTACATCTATTTTTTCGTAAAGACATTCCGGCGGTTTATGATTTATCACTGCTGAAAGCCC CGCAAGCGGCTATCCGCGATATGAATACGTTCAAAACCGGCTGGTTGGTCCTTGCCCTACTGCTGATCGGGTTCTTTGCT CTGGAACCGCTCGGTGTTCCAGTCAGTTTGGTGGCCGCCGTCGGTGCGCTGATTTTGTTGGCTGTAGCGAAAAAAGGACA TGCCATCAATACGGGAAAAGTGCTACGTGGTGCACCTTGGCAAATTGTTATTTTTTCATTAGGGATGTATCTGGTGGTTT ATGGTCTGCGTAATGCGGGTCTGACCCACTATATTTCAGCGTTGCTAAACCGACTGGGTGAACAGGGGCTGTGGGCGTCA ACTTTAGGGACTGGCTTCTTAACCGCGTTTCTCTCTTCCATTATGAATAATTTACCCACCGTTCTGGTAGGGGCACTTTC TATCGAAGGCAGCACGGCAACCGGGTTAATTAAAGAGGCGATGATTTATGCCAATGTTATTGGTAGCGATCTCGGGCCGA AAATCACCCCTATAGGTAGCCTGGCCACTTTATTGTGGCTGCATGTTTTGTCGCAAAAAAATATGACCATCACTTGGGGA TATTATTTCCGAGTAGGGATTATCATGACCCTTCCAGTGCTATTGGTGACGTTGAGCGCGCTCGCACTACGATTGTCCGT ATCGATGTAA Protein sequence : MLLAGAIFILTIVLVIWQPKGLGIGWSAMLGAGLALLTGVVHVSDIPVVWQIVWNATATFIAIIIISLLLDESGFFEWAA LHVARWGNGHGRRLFTYIILLGAAVAALFANDGAALILTPIVIAMLLALGFGRGATLAFVMAAGFIADTASLPLIVSNLV NIVSADFFNLGFTEYAAVMVPVNLVAVIATLAMLHLFFRKDIPAVYDLSLLKAPQAAIRDMNTFKTGWLVLALLLIGFFA LEPLGVPVSLVAAVGALILLAVAKKGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTHYISALLNRLGEQGLWAS TLGTGFLTAFLSSIMNNLPTVLVGALSIEGSTATGLIKEAMIYANVIGSDLGPKITPIGSLATLLWLHVLSQKNMTITWG YYFRVGIIMTLPVLLVTLSALALRLSVSM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 9e-150 | 85 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-102 | 59 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 4e-98 | 57 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 2e-101 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| arsB | YP_069326.1 | arsenical efflux pump/H+ antiporter, arsB | BAC0578 | Protein | 2e-153 | 87 |
| arsB | YP_069326.1 | arsenical efflux pump/H+ antiporter, arsB | BAC0576 | Protein | 2e-151 | 86 |
| arsB | YP_069326.1 | arsenical efflux pump/H+ antiporter, arsB | BAC0031 | Protein | 5e-144 | 84 |
| arsB | YP_069326.1 | arsenical efflux pump/H+ antiporter, arsB | BAC0577 | Protein | 1e-145 | 82 |
| arsB | YP_069326.1 | arsenical efflux pump/H+ antiporter, arsB | BAC0575 | Protein | 2e-101 | 58 |
| arsB | YP_069326.1 | arsenical efflux pump/H+ antiporter, arsB | BAC0574 | Protein | 2e-101 | 58 |
