Gene Information

Name : YPTB0072 (YPTB0072)
Accession : YP_068621.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5464
EC number : -
Position : 83279 - 84238 bp
Length : 960 bp
Strand : +
Note : similar to Yersinia pestis YPO0076 conserved hypothetical protein (99.6% evalue=0); Salmonella typhimurium PSLT051 samB; cytoplasmic protein (62% evalue=1.E-108)

DNA sequence :
GTGATTGCTCAGGAGGATGCTCATGATTATCATCGCCCGATGAAAACAACCCCTACCCCCCACGACGCTCTCTTTAAGAA
TTTTATGACCCAGCCCGCCACGGCGTGTGACCTGCTGGAGTTTCACTTGCCGCCTGAATTGCGGCAACTTTGTGACCTGA
GCACGCTGCGGCTGGAATCCGGCAGTTTCATTGAAAACAACCTGCGTGCCTGTTACTCGGACGTGCTCTATTCGCTAAAA
ACGACGGTGGGAGACGGTTATGTTTACGCTCTCATTGAGCATCAAAGCTCCCCTGATAAACATATGGCTTTTCGCCTGAT
GCGCTACGCTATTGCAGCCATGCAGAGCCATCTGGAGGCGGGGTACGATAAGTTGCCGCTGGTGATCCCCATCCTCTTCT
ATCATGGAATGGTCACGCCGTACCCGTACCCGATGAGCTGGCTGCACGCCTTTAACCAGCCAGAACTCGCTGGACAGTTG
TATTGCGGAAACTTCCCGTTGGTTGATGTGACGGTGATCCCCGATCATGAAATCATGACCCATCGGCGCATTGCCCTGCT
GGAACTGTTGCAAAAACATATTCGCCAGCGTGATTTATCTGAATTATTGGATCAACTGGTCATACTGATAGCGAGCGGTT
ACACTACGGAAGATCAGCTAAAATCTGCGATAAATTACATCATACAGGTTGGCGAAACGGCCGAACCGGAAGTGTTCATC
CGTAGCCTGGCCCACCGCTTACCGGAGCATGAGGAGTCACTGATGACGATTGCACAAAAACTGGAACAAAAAGGTGAAGC
CAGAGGTATTGTAAAAGGCCGTGTAGAAGGCCGAGTCGAAGGGGCGCAAGAGACGGCTCTGAAAATTGCTCGTACTATGC
TGGCTAATGGTCTTGACCGCGCCACAGTAATGAAAATGACCGGTCTGAGCGAAGAAGAATTGACTCAGATTCACCATTGA

Protein sequence :
MIAQEDAHDYHRPMKTTPTPHDALFKNFMTQPATACDLLEFHLPPELRQLCDLSTLRLESGSFIENNLRACYSDVLYSLK
TTVGDGYVYALIEHQSSPDKHMAFRLMRYAIAAMQSHLEAGYDKLPLVIPILFYHGMVTPYPYPMSWLHAFNQPELAGQL
YCGNFPLVDVTVIPDHEIMTHRRIALLELLQKHIRQRDLSELLDQLVILIASGYTTEDQLKSAINYIIQVGETAEPEVFI
RSLAHRLPEHEESLMTIAQKLEQKGEARGIVKGRVEGRVEGAQETALKIARTMLANGLDRATVMKMTGLSEEELTQIHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilW CAF28495.1 putative transposase Not tested YAPI Protein 1e-115 74
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 1e-109 73
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 4e-107 72
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 8e-95 61
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 2e-65 49