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Name : ypjF (YPTB3866) Accession : YP_072344.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4617726 - 4618190 bp Length : 465 bp Strand : - Note : similar to Escherichia coli b2646 ypjF; hypothetical 12.3 kD protein in alpA-gabD intergenic region (67.3% evalue=2.E-34); Escherichia coli JW2627 ypjF; Hypothetical protein (67.3% evalue=2.E-34) DNA sequence : ATGTGTATCTCGCTATTTATCCTACTCCCCAATCAACTGCATAAATCTTCGCCTTTTATTTCTATCGATCATCTAGCTAA CTACGAGATAACCCATATGCAGATCTTACCTGTTACTCCGAAACGGGCGGCTTATGCTTGCCCATCACCCGTTGTTGTCT GGCAATCCATGCTCACGTATCTGCTGGAACAGCATTACGGATTGGCTCTTAACGATACCGAGTTCAGTGATGACGCCGTG ATCCACGAATATATTGATGCTGGTATCTCTCTGTCCGATGCGTTGAATTTCACGGTGGAAAAGTTTGGCCTGGTTCGTAT CGATCGCCGGGGGTTCTCCTGCCAGGAACAATCTCCCTTCATCACGGCTATCGATATTCTCCGTGCCCGTCGAGCCACCG GCCTGATGACCCGTCTGGGTTACCAGACCATCATCTCAGTTATCCGGGGCGAAAAGCAGACATGA Protein sequence : MCISLFILLPNQLHKSSPFISIDHLANYEITHMQILPVTPKRAAYACPSPVVVWQSMLTYLLEQHYGLALNDTEFSDDAV IHEYIDAGISLSDALNFTVEKFGLVRIDRRGFSCQEQSPFITAIDILRARRATGLMTRLGYQTIISVIRGEKQT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67342.1 | intergenic-region protein | Not tested | PAI II CFT073 | Protein | 7e-32 | 61 |
| unnamed | AAK00482.1 | unknown | Not tested | SHI-1 | Protein | 2e-32 | 60 |
| yeeV | NP_838487.1 | hypothetical protein | Not tested | SHI-1 | Protein | 3e-32 | 60 |
| yeeV | NP_708773.1 | hypothetical protein | Not tested | SHI-1 | Protein | 3e-32 | 60 |
| unnamed | CAD66207.1 | hypothetical protein | Not tested | PAI III 536 | Protein | 6e-30 | 60 |
| ECO103_3592 | YP_003223449.1 | hypothetical protein | Not tested | LEE | Protein | 4e-31 | 59 |
| yeeV | YP_854325.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 2e-31 | 59 |
| unnamed | AAL57575.1 | unknown | Not tested | LEE | Protein | 7e-30 | 59 |
| yeeV | CAE85204.1 | YeeV protein | Not tested | PAI V 536 | Protein | 2e-30 | 59 |
| z5091 | CAD33789.1 | Z5091 protein | Not tested | PAI I 536 | Protein | 1e-29 | 58 |
| unnamed | CAI43848.1 | hypothetical protein | Not tested | LEE | Protein | 5e-30 | 58 |
| Z5091 | NP_290242.1 | hypothetical protein | Not tested | LEE | Protein | 3e-29 | 58 |
| aec76 | AAW51759.1 | Aec76 | Not tested | AGI-3 | Protein | 5e-30 | 58 |
| unnamed | AAC31486.1 | L0007 | Not tested | LEE | Protein | 2e-29 | 58 |
| ECs4539 | NP_312566.1 | hypothetical protein | Not tested | LEE | Protein | 3e-29 | 58 |
| unnamed | ACU09433.1 | conserved hypothetical protein | Not tested | LEE | Protein | 2e-29 | 58 |
| unnamed | AAL67389.1 | L0007-like protein | Not tested | PAI II CFT073 | Protein | 2e-29 | 58 |
| yeeV | ADD91699.1 | YeeV | Not tested | PAI-I AL862 | Protein | 2e-29 | 58 |
| c5149 | NP_756997.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 2e-29 | 58 |
| unnamed | CAD42101.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-29 | 58 |
| unnamed | AAL08478.1 | unknown | Not tested | SRL | Protein | 2e-28 | 57 |
| yeeV | AAZ04461.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 7e-31 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ypjF | YP_072344.1 | hypothetical protein | VFG0663 | Protein | 9e-33 | 60 |
| ypjF | YP_072344.1 | hypothetical protein | VFG1682 | Protein | 3e-30 | 60 |
| ypjF | YP_072344.1 | hypothetical protein | VFG0786 | Protein | 9e-30 | 58 |
| ypjF | YP_072344.1 | hypothetical protein | VFG1530 | Protein | 5e-30 | 58 |
| ypjF | YP_072344.1 | hypothetical protein | VFG1620 | Protein | 7e-30 | 58 |
| ypjF | YP_072344.1 | hypothetical protein | VFG1069 | Protein | 1e-28 | 57 |
