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Name : YPTB3545 (YPTB3545) Accession : YP_072027.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 4210606 - 4212075 bp Length : 1470 bp Strand : - Note : similar to Salmonella typhi STY2911 gabD; succinate-semialdehyde dehydrogenase (56.8% evalue=1.E-155); Salmonella typhimurium STM2791 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent (57% evalue=1.E-156) DNA sequence : ATGCCCGCACAAAATCCTTTACAACATCAACGACAGCACGACGGTATATACCACATTGGCTATTTTGTCGGTGGAAAATG GTCTCAGGCACAGGAGCAATTTGACGTCTGCAACCCGGCAACCGGCGAGCTGGTCGCCAGAGTGGCTAAATCCGGTAAAC AAGAAACCGAAGCGGCGATTAAAGCTGCCAGCGAGGCTTTCCCTGCCTGGCGAAAAACGCCCGCTAAACAGCGAGCAGAG ATTTTACAGCGTTGGTATTTGCTGATAATGGAACATCAGCAATCATTGGCAGAGCTGATGGTCTCCGAGCAAGGTAAACC CTTAAAAGAAGCCTTGGTGGAAGTGGCTTATGCCGCCAGTTTTATCCAATGGTTTAGTGAGCAGGCCAAGCGGGCTAACG GTGAAATTATCCCGTCAGCCAAAGAGGGCGCACGTATCCTGGCGACCCGCGAACCGATTGGTGTGGTAGCCGCTATCACA CCGTGGAATTTCCCGCTCGCGATGCTCACCCGCAAACTGGGGCCAGCACTGGCCGCCGGTTGTACCGGGCTGATTAAACC TGCCAATAACACGCCATTATCTGCCTTCGCCTTACTGGCACTGGCAGAACAGGCTGGCGTGCCAGCTGGGGTACTCAATG GTGTCGTGGGGGATACTCATGCTATCAGCGACGCGATTATGGCCAGTTCAGACGTGCGTAAAATCTCCTTTACCGGCTCA ACCAATGTCGGTAAAACGCTGATGCGCAATGCTGCTGCAACCATGAAGAGAATTTCGATGGAGCTGGGCGGTAACGCGCC TTACATCGTTTTTGATGATGCCGATTTAGAGGCGGCGGTCGCCGGTGCTATGGCGTGTAAATTCCGTAATGCCGGGCAGG TGTGTGTGTGCGTCAATCGCTTCTATATTCAGGATGCTATCTACGACGAGTTTGTTAACCGCTTGGCTGCCGAGGTGAAA AAACTGAAGGTCGGCAACGGGATGGATAAAGACGTCAACATGGGGCCGTTGATTAATCTGGCCGGTCTGGAGAAAGTAGA AGAGCACGTAAAAGACGCGCTTGAGAAGGGGGGGCGTCTTTTAGCGGGGGGGCATCGCCATGCGCTGGGCGGTAATTTCT TCCAGCCAACGGTGATTGCAGATGCCAATGAGCAGATGAAAGTGGCCTCGGAAGAGACATTTGGCCCGCTGGCCGCCTGC TTCCGTTTCAGCACTGAAGCCGAAGTGATTCAACGGGCCAATAATACGCCATTTGGGCTGGCGGCCTATTTCTATACGCA GAACTTGCAACGGGTGTTCCGCGTTTCAGAGGCGTTGGAAAGCGGTATGATTGGCGTCAATGAATGCTCGGTTTCGACCG AGTTGGCCCCTTTCGGTGGTGTTAAAGAGTCTGGCCTAGGTCGTGAAGGTTCGGTGCTGGGGTTGGATGAATTTATGGAA GTGAAAACCCTGCATTTGGGTAACTTGTAG Protein sequence : MPAQNPLQHQRQHDGIYHIGYFVGGKWSQAQEQFDVCNPATGELVARVAKSGKQETEAAIKAASEAFPAWRKTPAKQRAE ILQRWYLLIMEHQQSLAELMVSEQGKPLKEALVEVAYAASFIQWFSEQAKRANGEIIPSAKEGARILATREPIGVVAAIT PWNFPLAMLTRKLGPALAAGCTGLIKPANNTPLSAFALLALAEQAGVPAGVLNGVVGDTHAISDAIMASSDVRKISFTGS TNVGKTLMRNAAATMKRISMELGGNAPYIVFDDADLEAAVAGAMACKFRNAGQVCVCVNRFYIQDAIYDEFVNRLAAEVK KLKVGNGMDKDVNMGPLINLAGLEKVEEHVKDALEKGGRLLAGGHRHALGGNFFQPTVIADANEQMKVASEETFGPLAAC FRFSTEAEVIQRANNTPFGLAAYFYTQNLQRVFRVSEALESGMIGVNECSVSTELAPFGGVKESGLGREGSVLGLDEFME VKTLHLGNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-130 | 59 |
