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Name : YPTB0330 (YPTB0330) Accession : YP_068876.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : secretion system apparatus protein SsaU Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 394627 - 395694 bp Length : 1068 bp Strand : + Note : member of a type III secretion system which is part of a pathogenicity island in Salmonella, Yersinia and pathogenic Escherichia coli DNA sequence : ATGTCCACTGAAAAGAATGAAAAACCCACGCCCAAGCGCCTTAAGGAAGCCAAAGAAAAAGGGCAGGTAGTCAAAAGTGT TGAGATAACCTCCGGCGTACAGTTGGTGGCGCTGGTTATCTACTTTTTACTGACAGGATATAGCTTGGTCGAGCAGGCTA AAGCCCTTATCCGCAGTTCAATCATACAATTACAGCAACCACTTACTCTGGCTTTAGCCCGTATCGGTGCCGAGTGCATG ACGGTATTGATGCATATCGTGGTGGTCTTGGGCGGGGCGCTGATCGTGGTCACCATTATTGCCGGTATTGCTCAGGTTGG GCCGTTGTTGGCGACCAAAGCGGTGTCGTTTAAAGGTGAGCGAATTAACCCCATTCAAAATGCTAAACAACTTTTCTCAT TGCGCAGCGTGTTTGAGCTGATGAAATCATTATTGAAAGTGGGGGTGCTAACGCTGATTTTTGGTTACTTATTGATGCAG TATGCGCCCTCTTTTGGTTATTTGACCCACTGTGGCAGTCGCTGTGCTCTCCCGGTATTCTCGACATTAATGGGGTGGTT ATTAGGTTCACTGATTGCCTGCTATCTGGTTTTTTCACTGATGGATTATGCTTTTCAGCGCTACACCATCATGAAACAAC TGAAAATGTCCCATGATGAGGTCAAGCGGGAGCATAAAGACAGTAATGGGGATCCGCACATTAAGCAGAAGCGGCGGCAG CTACAGCATGAAGTACAAAGCGGTAGTTTTGCCACTAACGTGCGCCGTTCCACCGCGGTAGTCCGTAACCCGACACATTT TGCCGTTTGTCTGATTTATCACCCAGAAGAGACGCCGCTACCGATAGTGATTGAAAAAGGTCATGACGAGCAGGCTGCAT TGATTGTGAGCCTCGCAGAGCAGAGCGGTATCCCTGTGGTAGAAAACATTGCGCTGGCGCGTGCATTACACCGTGATGTT GCTTGTGGTGACACCATCCCAGAACAATTCTTCGAGCCAGTTGCTGCGCTCTTACGTATGGCACTGGAGTTGGATTATCA GCCATCAAGTGATGATCCACCGCGCTAG Protein sequence : MSTEKNEKPTPKRLKEAKEKGQVVKSVEITSGVQLVALVIYFLLTGYSLVEQAKALIRSSIIQLQQPLTLALARIGAECM TVLMHIVVVLGGALIVVTIIAGIAQVGPLLATKAVSFKGERINPIQNAKQLFSLRSVFELMKSLLKVGVLTLIFGYLLMQ YAPSFGYLTHCGSRCALPVFSTLMGWLLGSLIACYLVFSLMDYAFQRYTIMKQLKMSHDEVKREHKDSNGDPHIKQKRRQ LQHEVQSGSFATNVRRSTAVVRNPTHFAVCLIYHPEETPLPIVIEKGHDEQAALIVSLAEQSGIPVVENIALARALHRDV ACGDTIPEQFFEPVAALLRMALELDYQPSSDDPPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0273 | YP_002345355.1 | secretion system apparatus protein SsaU | Virulence | Not named | Protein | 4e-160 | 99 |
| ssaU | NP_456106.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 6e-73 | 49 |
| ssaU | NP_805093.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 6e-73 | 49 |
| ssaU | CAA68202.1 | secretion system apparatus, SsaU | Virulence | SPI-2 | Protein | 6e-73 | 49 |
| ssaU | YP_216430.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 6e-72 | 49 |
| ssaU | NP_460387.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 8e-73 | 49 |
| escU | AFO66307.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-58 | 42 |
| escU | AFO66403.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-58 | 42 |
| escU | AAK26703.1 | EscU | Virulence | LEE | Protein | 5e-63 | 42 |
| escU | AAL57530.1 | EscU | Virulence | LEE | Protein | 5e-63 | 42 |
| escU | YP_003236100.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 1e-62 | 42 |
| escU | CAI43886.1 | EscU protein | Virulence | LEE | Protein | 5e-63 | 42 |
| escU | NP_290280.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 1e-62 | 42 |
| escU | CAC81850.1 | EscU protein | Virulence | LEE II | Protein | 4e-63 | 42 |
| ECs4580 | NP_312607.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 1e-62 | 42 |
| escU | YP_003223487.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 7e-63 | 42 |
| escU | AAC38372.1 | EscU | Virulence | LEE | Protein | 1e-62 | 42 |
| escU | YP_003232141.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 6e-63 | 42 |
| escU | AAC31525.1 | L0046 | Virulence | LEE | Protein | 9e-63 | 42 |
| escU | ACU09470.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 9e-63 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTB0330 | YP_068876.1 | secretion system apparatus protein SsaU | VFG0522 | Protein | 3e-73 | 49 |
| YPTB0330 | YP_068876.1 | secretion system apparatus protein SsaU | VFG0718 | Protein | 6e-63 | 42 |
| YPTB0330 | YP_068876.1 | secretion system apparatus protein SsaU | VFG0824 | Protein | 5e-63 | 42 |
