Gene Information

Name : YPTB0329 (YPTB0329)
Accession : YP_068875.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein EscT/SsaT/YscT
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 393843 - 394637 bp
Length : 795 bp
Strand : +
Note : similar to Yersinia pestis YPO0272 type III secretion apparatus protein (100% evalue=1.E-145); Salmonella typhi STY1699 ssaT; type III secretion protein (51.7% evalue=2.E-66)

DNA sequence : 
ATGACTGACGTCCTCCCCGGTCTGACCGCACTCGCATTAGCCATGATGCGGCCCTACGGTATCTTACTGATATTACCGCT
GTTTACCGCCCGCAGTTTGGGGAGCAGCTTATTGCGTAATGGCTTGATTGTTGCCATCGCGCTGCCGGTCACGCCGCTAT
TTTTATCCGCACCCATCATCACCAATAGTAGCCCGGTCACTTGGATTGGGGTGTTATGCACGGAGCTACTCATTGGGGTG
GTGATGGGGTTTGTCGCCGCATTGCCTTTCTGGGCTATGAATATGGCGGGTTTCCTGATCGATACCTTACGCGGGGCAAC
GATGTCCACGTTGTTTAACCCCGGTATGGGCGTCGAATCCTCCCTTTTTGGTGTGCTGTTTACCCAAATATTAACGGTAC
TGTTCCTGATTTCTGGCGGTTTTAATCAGGTGTTGGCGGCGTTGTACGGCTCGTACGATAGCTTACCCATCGGCCAGGGT
ATCCAGCCTGCTGCAGATCTATTGCTCTTTCTGCAAACTGAGTGGCAGATGATGTTCGAGCTTTGCTTGTGCTTTGCCCT
ACCGGCACTGCTGGTCATGGTGTTGGCTGATCTCTCTTTAGGATTAATTAACCGCTCGGCCCGGCAACTGAATGTCTTTT
TTCTGGCGATGCCCATTAAAAGCGCACTGGCGCTTTTTCTCTTACTGATCAGCCTACCTTATGGCCTGCATCACTACCTG
TCCCGTATGAGCGATACTGAACAGAAGATTGGTACGTTGATCCCGTTGATTAAAGGGGGGAATGATGTCCACTGA

Protein sequence : 
MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCTELLIGV
VMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQG
IQPAADLLLFLQTEWQMMFELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYL
SRMSDTEQKIGTLIPLIKGGNDVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 4e-105 100
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 1e-44 52
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 1e-44 52
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 9e-45 52
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 2e-44 51
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-44 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTB0329 YP_068875.1 type III secretion apparatus protein EscT/SsaT/YscT VFG0521 Protein 1e-44 51