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Name : YPTB0319 (YPTB0319) Accession : YP_068865.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : type III secretion system apparatus lipoprotein, EscJ/SsaJ Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 385529 - 386260 bp Length : 732 bp Strand : + Note : similar to Yersinia pestis YPO0263 type III secretion system apparatus lipoprotein (99.5% evalue=1.E-133); Salmonella typhi STY1711 ssaJ; pathogenicity island lipoprotein (45.3% evalue=9.E-56) DNA sequence : ATGAAATCTCTGCGGCAGATGTTAGCGATAGTCCTAATGACATTATCCCTTTCCGGTTGTGATATGGAGCTGTATAGCGG GCTGTCTGAGGGGGAGGCCAATCAAATGCTGGCATTGCTGATGCTGCACCAAATTAACGCCGAAAAACAGATCGAAAAGA GCGGGATGGTGGGGCTAACGGTCGATAAGCGGCAATTTATTAATGCCGTTGAGTTGCTACGACAGAATGGTTTCCCCCGA CAGCGTTTTATCACGGTGGATGAGCTGTTTCCTGCTAACCAGTTAGTGACCTCTCCCACGCAAGAGCAGGCCAAGATGGT TTTTCTGAAAGAACAGCAGTTGGAAAACATGTTGAGCCATATGGATGGGGTGATTCATGCCGATGTCACGGTGGCAATGC CTATGTCGGTTGACGGGAAAAACCCGCTTCCGCATACCGCCTCGGTGTTTATCAAGTATTCGCCGGAAGTCAATTTACAA AGCTATCAGTCGCAAATCAAAGGGTTGGTCCGCGATGCGGTTCCCGGTATTGATTACGCCAAGATAAGCGTAGTGATGCA GCCTGCGAACTACCGTTTCAGTGCCTCAGAGGCAGAGCAACAACAGGGGCCACAAACCACGGTGCAATGGCTATTACGCC ATGTAGGAATGGTGCAGAACATGGTGGGAGTGGCGTTTATCTCACTTATTGTATTGATGTTTGTAGGCTGGTTTTATTCT CGGCGTCGGTAA Protein sequence : MKSLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVDKRQFINAVELLRQNGFPR QRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMDGVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQ SYQSQIKGLVRDAVPGIDYAKISVVMQPANYRFSASEAEQQQGPQTTVQWLLRHVGMVQNMVGVAFISLIVLMFVGWFYS RRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0263 | YP_002345344.1 | type III secretion system apparatus lipoprotein | Virulence | Not named | Protein | 3e-113 | 99 |
| ssaJ | CAA12196.1 | SsaJ | Virulence | SPI-2 | Protein | 5e-50 | 53 |
| ssaJ | YP_216417.1 | secretion system apparatus protein SsaJ | Virulence | SPI-2 | Protein | 6e-50 | 48 |
| ssaJ | NP_456119.1 | putative pathogenicity island lipoprotein | Virulence | SPI-2 | Protein | 2e-50 | 48 |
| ssaJ | NP_805080.1 | pathogenicity island lipoprotein | Virulence | SPI-2 | Protein | 2e-50 | 48 |
| ssaJ | CAA70532.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 1e-50 | 48 |
| ssaJ | NP_460374.1 | needle complex inner membrane lipoprotein | Virulence | SPI-2 | Protein | 2e-50 | 48 |
| escJ | AAC31518.1 | L0039 | Virulence | LEE | Protein | 1e-36 | 41 |
| ECs4573 | NP_312600.1 | EscJ | Virulence | LEE | Protein | 1e-36 | 41 |
| escJ | ACU09463.1 | EscJ protein | Virulence | LEE | Protein | 1e-36 | 41 |
| escJ | YP_003236093.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 1e-36 | 41 |
| escJ | AAC38379.1 | EscJ | Virulence | LEE | Protein | 1e-36 | 41 |
| escJ | NP_290273.1 | hypothetical protein | Virulence | LEE | Protein | 1e-36 | 41 |
| unnamed | AAL06364.1 | EscJ | Virulence | LEE | Protein | 2e-36 | 41 |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 1e-37 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTB0319 | YP_068865.1 | type III secretion system apparatus lipoprotein, EscJ/SsaJ | VFG0510 | Protein | 8e-51 | 48 |
| YPTB0319 | YP_068865.1 | type III secretion system apparatus lipoprotein, EscJ/SsaJ | VFG0218 | Protein | 1e-37 | 42 |
| YPTB0319 | YP_068865.1 | type III secretion system apparatus lipoprotein, EscJ/SsaJ | VFG0817 | Protein | 6e-37 | 41 |
| YPTB0319 | YP_068865.1 | type III secretion system apparatus lipoprotein, EscJ/SsaJ | VFG0725 | Protein | 6e-37 | 41 |
