|
Name : YPTB0313 (YPTB0313) Accession : YP_068859.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : type-III secretion protein, EscD/SpiB Function : - COG functional category : - COG ID : - EC number : - Position : 382445 - 383659 bp Length : 1215 bp Strand : + Note : similar to Yersinia pestis YPO0258 type-III secretion protein (99.7% evalue=0); Salmonella typhi STY1725 ssaD; pathogenicity island protein (31% evalue=4.E-52) DNA sequence : ATGACCACCGTATTCAAGCTTCGCCTGTTAAATGGTGATCTCAATGGTCGTGAGCTGATATTACCGGAAGGTGAATTTAC ACTGGGGGAGCAGGGGTGTGATGTTCTGCTGCCTTTATCTGACGGCAATATAGTGACGCTATGTGTTAATGAATATCAGG TAATGATACAGGTGGCGGAGGAGGTTTGGATTAATGGTGCACAGCACGATTTACACACTCCCCTTCCACTGTTGCAATCT ATTGAAATTGCCGGATTGGTATTCGTTCTGGGTGAACAAACGGATATTTTGAGTGGAATTAAAGTCACTCACCGTGCGAG GTTCCCTTTATTGGTATGGCTAGCTATTGCGATATGTGTCCCCTTATCACTGCTGTTTGTTTTTTTATTTTGGTTAACCA CTCAGCCTGAGACATTACGTGCTTCGATTCCTGCGGATGTCCCGACGCAATTAGCCGAACGCCTGCGCGAACCCGCTTTA CAGGGAATAAAGGGAACCTGGCTAGCGGATGGGAGTGTCACATTAAGTGGGCATTGTGCCTCGTCCTCAATGATGGAACC ACTGCAACATTTTTTACTGCGTAACCATATCGCCTTTCGTAACCAATTGGTGTGTGATGATCGCTTAATCGCTTCCGTTA GCGATCTATTACATCAGCATGGTTACCACGATATTGAGGTGCGCATCGGTGATGAACCGGGAAATATTGTGATTTATGGT GCCGTTCAAATGGGTGATCAGTGGTTAACCGTGCAGGACACGCTGGCGGCGGTTTCAGGGTTGAAAGGTTGGCTGGTGGT CAATGCTCATTCAGGGCAAATACAACAACTGGTGGAGCGCTTGAGAGCGGCAGGCTTATTAGGATTCTTAAGCATGACGG AAAGTAATAAAGAGTTGGCCATCAGTGGTGTGCTGTCATCTGAACAGCAGCAGCAGTTAAAGGAGACATTGGCCGCTTTA TCTCAGCAGCAACCCGGTTTTCCGTCAGTCAGGTATCAGAATATTCCGGCGTCAGACCGAACGGATCAATTTCTTCCGGC AAAGGTCGTGAGCTATGGAGGAAATACCCAGTCGGCATTTGTGCGGTTAGCCAATGGTGGGCGTTTGCAGCAAGGGAGCG TGTTGGCAAATGGCTATAAAGTGGTTTTTATTGGGGAACAGGGACTGACGTTATTAAAAGCAAATAATTTAGTACATATC CCCATGGATTTCTAA Protein sequence : MTTVFKLRLLNGDLNGRELILPEGEFTLGEQGCDVLLPLSDGNIVTLCVNEYQVMIQVAEEVWINGAQHDLHTPLPLLQS IEIAGLVFVLGEQTDILSGIKVTHRARFPLLVWLAIAICVPLSLLFVFLFWLTTQPETLRASIPADVPTQLAERLREPAL QGIKGTWLADGSVTLSGHCASSSMMEPLQHFLLRNHIAFRNQLVCDDRLIASVSDLLHQHGYHDIEVRIGDEPGNIVIYG AVQMGDQWLTVQDTLAAVSGLKGWLVVNAHSGQIQQLVERLRAAGLLGFLSMTESNKELAISGVLSSEQQQQLKETLAAL SQQQPGFPSVRYQNIPASDRTDQFLPAKVVSYGGNTQSAFVRLANGGRLQQGSVLANGYKVVFIGEQGLTLLKANNLVHI PMDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0258 | YP_002345338.1 | type-III secretion protein | Virulence | Not named | Protein | 0.0 | 99 |
