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Name : iucD (YPTB3266) Accession : YP_071759.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : siderophore biosynthesis protein IucD Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG3486 EC number : - Position : 3848060 - 3849388 bp Length : 1329 bp Strand : + Note : deleted EC_number 1.13.12.10; similar to Yersinia pestis YPO0993 iucD; siderophore biosynthesis protein IucD (99.5% evalue=0); Mesorhizobium loti mlr5923 lysine:N6-hydroxylase (35.5% evalue=4.E-65) DNA sequence : ATGAATCAGCCTCTGGATTTCATCGGCATTGGCATCGGCCCATTTAACCTCAGTATTGCCGCACTTGGCAGTGAAGTTTC TGGCTTTAACAGTAAATTTCTCGAACGTAAACCGCACTTTTCCTGGCACCCTGGCATGATGGTGCCAGACTGCCATATGC AGACCTGCTTCCTAAAAGACTTGGTCAGCGCAGTCTCCCCGACTAACACGTACAGCTTTCTTAACTATCTGGTGCAGCAT AAGAAATTCTACCGTTTTCTGACCACCGAGCACCGGACCGTTTCCCGTGAGGAGTTTGCGGACTACCTCCGTTGGGCCGC CAGTGGCATGAGTTCGCTCGAGTTTAGCCAAGATATTCAGAGCGTGGATTTTGACGACCAGCAGCGCCATTTTGTCGTTA CCACCCCGCGTAATGTCTACCACGCGCGCCACGTTTGCCTGGGGATAGGCAAACGCATCAAACTGCCAGACTGCGTGACC GAGCAAAATGACCGCTGCTTCCATGCCAGCGAAATGGCACTGCGTAATCCAGATCTGACCGGTAAACGCGTCACCATTGT GGGCGGCGGCCAGAGCGGGGCGGACCTGTTCCTGAACATCTTTCTCGCTGCATGGGGGCAGCCAAAGCAGCTGAACTGGA TTTCACGCCGTAACAACTACAACGCGCTGGATGAAGCCGCTTTTGCCAATGAGTACTTCATGCCGGAATACGTTGAGAGT TTCTACACCCTGAACGACAGCGCCAAACAGCATATGCTGGCAGAACAGAGAATGACCTCTGACGGCATTACCAGTGAATC ACTACTGGCGATTTACCGTGCTATGTACCACCAATTTGAAGTGTTACGTGAAAAACCGTGGGCGCGCCTGCTCCCCAGCC GCTCACTGACCAATATGCATACGCGCGGCAACGGTTACCAATTACTCACCCATCACCATCTCGATCAAGGCACAGAGACT TTTGATACCGATGTGGTAATCTTCGCCACGGGTTATCAGCAGGATCGTCCGGCGTTTCTCGATCCATTAGCTGATCGTCT GCAAACCACCGCCGATTGCCAGTACCAAGTGGCTCCAGATTTTGTCCTCGACTGGCAAGGCCCGCGTGAAAACTGCTTGT TCGCCGTGAATGCCGGTATGCATAGCCACGGCATTGCCGAACCTCAGCTCAGCCTGATGGCTTGGCGATCAGCACATATT CTCAACCGGGCTTTAGGGCGCACTCAGTTCGATTTAACTTCCACCCCGGCGGTGATCCAATGGCGCAGCCAACAGTCGGG TGTCCCTGCCCACCCGGAACATCCCGTGCTCAACTGCATCGACATTTAA Protein sequence : MNQPLDFIGIGIGPFNLSIAALGSEVSGFNSKFLERKPHFSWHPGMMVPDCHMQTCFLKDLVSAVSPTNTYSFLNYLVQH KKFYRFLTTEHRTVSREEFADYLRWAASGMSSLEFSQDIQSVDFDDQQRHFVVTTPRNVYHARHVCLGIGKRIKLPDCVT EQNDRCFHASEMALRNPDLTGKRVTIVGGGQSGADLFLNIFLAAWGQPKQLNWISRRNNYNALDEAAFANEYFMPEYVES FYTLNDSAKQHMLAEQRMTSDGITSESLLAIYRAMYHQFEVLREKPWARLLPSRSLTNMHTRGNGYQLLTHHHLDQGTET FDTDVVIFATGYQQDRPAFLDPLADRLQTTADCQYQVAPDFVLDWQGPRENCLFAVNAGMHSHGIAEPQLSLMAWRSAHI LNRALGRTQFDLTSTPAVIQWRSQQSGVPAHPEHPVLNCIDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iucD | AAK71634.1 | IucD | Virulence | SHI-3 | Protein | 6e-137 | 60 |
| iucD | YP_002414043.1 | L-lysine 6-monooxygenase | Virulence | Not named | Protein | 3e-137 | 60 |
| iucD | AAD44749.1 | IucD | Virulence | SHI-2 | Protein | 5e-137 | 60 |
| iucD | NP_839220.1 | lysine:N6-hydroxylase | Virulence | SHI-2 | Protein | 6e-137 | 60 |
| iucD | NP_709457.1 | lysine:N6-hydroxylase | Virulence | SHI-2 | Protein | 6e-137 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| iucD | YP_071759.1 | siderophore biosynthesis protein IucD | VFG1084 | Protein | 4e-137 | 60 |
| iucD | YP_071759.1 | siderophore biosynthesis protein IucD | VFG0937 | Protein | 1e-137 | 60 |
| iucD | YP_071759.1 | siderophore biosynthesis protein IucD | VFG0618 | Protein | 3e-137 | 60 |
