Gene Information

Name : iucC (YPTB3265)
Accession : YP_071758.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Virulence
Product : siderophore biosynthesis protein IucC
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : -
Position : 3846315 - 3848063 bp
Length : 1749 bp
Strand : +
Note : similar to Yersinia pestis YPO0992 iucC; siderophore biosynthesis protein IucC (99.8% evalue=0); Sinorhizobium meliloti SMa2410 rhbF; RhbF rhizobactin siderophore biosynthesis protein RhsF (34.8% evalue=5.E-89)

DNA sequence : 
ATGATCACCACCGATTACGCTAACTGGCAGCAGGTTAATCGCCACATGATCGCTAAAATCCTTAGCGAACTGGAATATGA
ACGCACTCTGCATGCTGAATTACACGGTGAAACAGGGCGCATCACCTTGCCCGGCGCGGTTTACACCTTTAACGGCAAGC
GGGGTATCTGGGGTTGGCTACATATTGATCCTGCCACGCTGCGCTGTGAGGGTGTGCCGCTCGCCGCTGACCACATGCTG
CGCCAACTGGCGCTCGTGCTGAAGATGGACGATTCGCAGGTCGCAGAGCACCTTGAAGATTTGTACGCCACACTGCGTGG
AGACATGCAATTACTCTCCGCTCGCCACGGTATGAGTGCGGAAGCGTTGATCGCCCTTAATGATGATGCCCTGCAATGCC
TGCTGGCCGGTCACCCGAAATTTATCTTCAACAAAGGCCGCCGCGGCTGGGGCTTAACCGCCCTGCAACACTATGCGCCC
GAATATCAGGGCCAATTTCGTCTGCATTGGGTCGCAGCCAAACGCGGCAGCTTTATTTGGTGCGTGGATGCCGAATACCC
GTTGGACAACTTGCTCAACAGCGCCATGGACCCCGCCGAACGCCAACGCTTTGATCGCCGCTGGCGTGAGTGCCAATTGA
ATGATGATTGGGTCCCGGTGCCTTTACATCCGTGGCAATGGCAGCAAAAAATTGCCTTGCACTTCCTGCCACAACTTGCC
GAGGGTGAACTGATCGAACTGGGTGAATTTGGCGATCACTATCTGGCGCAACAATCGTTACGCACATTAACCAATGTCAG
CCGCCGTGTGCCATTTGATATCAAACTGCCACTCACCATTTACAACACCTCTTGTTATCGTGGCATCCCAGGCAAATACA
TCAGCGCAGGCCCCGCGGCTTCGCGCTGGTTGCAGCAAGTCTTCGCACAAGACCGCACACTGCATGAAAGCGGGGCTGAG
ATCCTCGGTGAACCCGCCGCAGGTTATATGCTGCACCAGACCTACGCCACACTTGCCAAGGCGCCTTATCGCTGCCAGGA
AATGCTCGGTGTGATTTGGCGAGAGAATCCGTCCTGCTATTTGCGAGAGGGTGAACATGCCATTTTGATGGCGACGCTGA
TGGAAACCAACAATCAGGGTCATCCGCTGATCGCGGCCTATATTGCACGTTCGGGGTTAAGTGCTGAAGCCTGGCTGGAG
CAGATGTTCCGTGTGGTAGTGGTGCCGATGTACCACCTGATGTGTTGCTACGGCGTGGCGCTAATTGCCCACGGCCAGAA
CATCACTCTGGTAATGAAAGACCATGCCCCCCAGCGCATCCTATTGAAAGATTTCCAGGGCGATATGCGTCTGGTCGATA
AAGATTTTCCGCAAGCGGCCTCGCTGCCTAACGTGGTTAAAGAGGTGACTGTGCGCTTATCTGCCGACTACCTCATCCAC
GATCTGCAAACCGGCCATTTTGTCACCGTATTACGCTTTATTTCACCGTTGATGCAGGCTTGCAACCTGAGCGAATACCG
CTTCTATCAACTGCTGGCACAGGTGCTGGAGCGCTACATGGCGCAGCATCCAGATTTGGCAGACCGCTTTACCTTATTCA
ATTTATTTAAACCACAGATTATCCGTGTGGTCCTCAACCCAGTAAAACTCACCTACTCAGAGCAGGACGGCGGCAGCCGC
ATGTTGCCTGATTATTTGCAGGATCTGGATAACCCCCTTTATTTGGTCACCAAGGAGCTAGCCCAATGA

Protein sequence : 
MITTDYANWQQVNRHMIAKILSELEYERTLHAELHGETGRITLPGAVYTFNGKRGIWGWLHIDPATLRCEGVPLAADHML
RQLALVLKMDDSQVAEHLEDLYATLRGDMQLLSARHGMSAEALIALNDDALQCLLAGHPKFIFNKGRRGWGLTALQHYAP
EYQGQFRLHWVAAKRGSFIWCVDAEYPLDNLLNSAMDPAERQRFDRRWRECQLNDDWVPVPLHPWQWQQKIALHFLPQLA
EGELIELGEFGDHYLAQQSLRTLTNVSRRVPFDIKLPLTIYNTSCYRGIPGKYISAGPAASRWLQQVFAQDRTLHESGAE
ILGEPAAGYMLHQTYATLAKAPYRCQEMLGVIWRENPSCYLREGEHAILMATLMETNNQGHPLIAAYIARSGLSAEAWLE
QMFRVVVVPMYHLMCCYGVALIAHGQNITLVMKDHAPQRILLKDFQGDMRLVDKDFPQAASLPNVVKEVTVRLSADYLIH
DLQTGHFVTVLRFISPLMQACNLSEYRFYQLLAQVLERYMAQHPDLADRFTLFNLFKPQIIRVVLNPVKLTYSEQDGGSR
MLPDYLQDLDNPLYLVTKELAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucC AAD44748.1 IucC Virulence SHI-2 Protein 0.0 66
iucC NP_839221.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 66
iucC NP_709456.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 66
iucC YP_002414044.1 Aerobactin siderophore biosynthesis protein Virulence Not named Protein 0.0 66
iucC AAK71633.1 IucC Virulence SHI-3 Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucC YP_071758.1 siderophore biosynthesis protein IucC VFG0938 Protein 0.0 66
iucC YP_071758.1 siderophore biosynthesis protein IucC VFG0617 Protein 0.0 66
iucC YP_071758.1 siderophore biosynthesis protein IucC VFG1083 Protein 0.0 66