Gene Information

Name : iucB (YPTB3264)
Accession : YP_071757.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Virulence
Product : siderophore biosynthesis protein IucB
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1670
EC number : -
Position : 3845368 - 3846318 bp
Length : 951 bp
Strand : +
Note : similar to Yersinia pestis YPO0991 iucB; siderophore biosynthesis protein IucB (98.1% evalue=0); S. pombe SPBC17G9.06C spbc17g9.06c; hypothetical protein (42.2% evalue=5.E-41)

DNA sequence : 
ATGGGGCCACACGCTAAGTTAATACACTCCGGTGGCAGTTTTTACTGTGAACATCTGGGAAAGGCGCTGCCTCTTGCTCT
CGGGCTTGACGGCAGTGCCGTACTGCACTTGCCTGGGCCGTTACCGCCAGGTTGGTTGGTGCAAGCGCTGGATCAACTGT
TCATCGCCGCACCGCAGTTGACCGGTATCGCCTTGCCGTATGCCGAGTGGCGCGATGCACCACAGGCGATGGCTCTGTTT
GCCTTGACCCGCAGCGACTATGTGGCACGGGAGATATTTTATCAGTTACCGCTGTGGCTGGGTACAGAACGCAACCGGGC
TGCGGGTCAGATGCAATATGATACCGAGCGGCATCTTTGGTATCCGCAACGCCCGCCCCGCCCAGACGGAGAAGTCTATC
GCCGCTTCGATCCCAACATCAAACGTACCCTGAGTTTCCGGTTACCGGAAGTCGATCACGATGCCCCCCAGTTCACCCGT
TGGATGAACTCACCGCGCGTGGATGCCTTTTGGGAAATGAGCGGCCCACTTGACGTGCAGGCGGCTTATCTGCAACGCCA
GTTAGATTCCCCCTATTGCTACCCGCTGCTGGGATGTTTCGATGATCAACCATTCGGTTATTTCGAAGTGTACTGGGCGG
CGGAAGACCGCATTGGCCGCCACTACCGTTGGCAACCTTTTGACCGCGGTTTGCACATGCTGGTCGGTGAAGAGAACTGG
CGCGGCGCGCAATATATACACAGTTGGTTACGTGGACTGACGCATTATCTGTATCTGGACGAATCGCGCACCACGCGCGT
AGTGGCAGAACCGCGTATTGATAACCAGCGTTTGTTCCACCACCTACCCGCCGCTGGCTACCACACCTTAAAAGAGTTTG
ATTTCCCGCATAAACGTTCGCGTCTGATTATGAATCAACGCGCCGATTTCTTCCGGGAGGGTACACGATGA

Protein sequence : 
MGPHAKLIHSGGSFYCEHLGKALPLALGLDGSAVLHLPGPLPPGWLVQALDQLFIAAPQLTGIALPYAEWRDAPQAMALF
ALTRSDYVAREIFYQLPLWLGTERNRAAGQMQYDTERHLWYPQRPPRPDGEVYRRFDPNIKRTLSFRLPEVDHDAPQFTR
WMNSPRVDAFWEMSGPLDVQAAYLQRQLDSPYCYPLLGCFDDQPFGYFEVYWAAEDRIGRHYRWQPFDRGLHMLVGEENW
RGAQYIHSWLRGLTHYLYLDESRTTRVVAEPRIDNQRLFHHLPAAGYHTLKEFDFPHKRSRLIMNQRADFFREGTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 3e-97 65
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 3e-97 65
iucB AAD44747.1 IucB Virulence SHI-2 Protein 2e-97 65
iucB AAK71632.1 IucB Virulence SHI-3 Protein 2e-97 65
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 2e-96 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucB YP_071757.1 siderophore biosynthesis protein IucB VFG0939 Protein 8e-97 65
iucB YP_071757.1 siderophore biosynthesis protein IucB VFG0616 Protein 1e-97 65
iucB YP_071757.1 siderophore biosynthesis protein IucB VFG1082 Protein 1e-97 65