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Name : YPTB3262 (YPTB3262) Accession : YP_071755.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : major facilitator superfamily efflux protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 3842249 - 3843472 bp Length : 1224 bp Strand : - Note : similar to Yersinia pestis YPO0988 membrane protein (99.2% evalue=0); Caulobacter crescentus CC0751 multidrug resistance protein, (25% evalue=2.E-19) DNA sequence : ATGCGCATATCCTCAGAGTCTGACGCTCGCTCAAGCGGGCTTACATCGTCTACCCATTGGCCTTTAGCGTTCTGCGTTGG GTTACTGGGCATCGGGCAAAACGGTTTATTAGTGGTGTTACCGGTATTGGTAAGCCGCACTCATCTGTCATTGTCGGTGT GGGCGGGTCTATTGACACTTGGCTCAATGCTATTTTTAGTGGGATCGGCATGGTGGGGCCGGCAATCGGAGATCCGTGGC TGCAAATTTGTTGTCATCATGGCACTGGCAGGTTACTTGCTTAGCTTTGTTTTATTGGCGCTGGCGGTGTGGGGGTTGTC AGCAGGGTGGTTATCGGAAATGGCCGGTCTGGGCTGGCTAATCGTGGCTCGTATTATTTATGGCCTGACCGTCTCTGGTA TGGTGCCCGCTAGCCAGACCTGGGCACTACAGCGTGCCGGTTATGAGCAACGGATGGCGGCGCTGGCGACCATCAGTTCG GGGCTGAGCTGTGGCCGTCTGCTCGGCCCATTGTGTGCCGCCCTCGCGCTCTCAATACACCCGATAGCCCCCCTGTGGCT GATGGCAATTACACCACTGATCGCACTGCTGGTGGTGTATCGCCAATACAATGACCCGCCGTTACCCCCAGTGGTGCATC AACAAAATCGTTTACGCCTCAATATGTTGCCTTATTTACTGTGCGCGTTGTTGCTGGCAGCAACTGTCAGCCTGATGCAA CTTGGCCTGGCACCTCACCTAAGTCAATTGTTTAGCCATTCGGCCACCACGGTGAGCCACCACGTGGCCATTTTGCTTAG CATAGCCGCGGGTTGTACGTTGCTGGCACAGTTTCTGGTGGTTCGCCCACAACGTTTTACGCCACCTCAGTTGCTGCTAG TGGCAGCCTTGCTCATGGTGCTTGGCTTGGGGCTGATGTGTGTTCAACCGCTGGTACTATTCTATCTAGGTTGTGCGCTG GCTTCTTTCGGCGCCGCGATGGCGACACCGGGTTACCAACTGATGTTGAACGACCGGTTATCTACTGGCAAAGGCTCCGG CGTGATCGCTACCAGCCATACATTGGGCTATGGCATAAGTGCATTGATGGTGCCGGTAGTCGCAAAATTTTATGGTGAGT CACAGTTGGTAGCCGCGGCGTTCATGATGGCCATTTTGTTGGGGGGAATCAGTGGCTGGCTGTGGTGCCAGCATCGAACA ACCGCCCATTCTGTGGGAGAGTAA Protein sequence : MRISSESDARSSGLTSSTHWPLAFCVGLLGIGQNGLLVVLPVLVSRTHLSLSVWAGLLTLGSMLFLVGSAWWGRQSEIRG CKFVVIMALAGYLLSFVLLALAVWGLSAGWLSEMAGLGWLIVARIIYGLTVSGMVPASQTWALQRAGYEQRMAALATISS GLSCGRLLGPLCAALALSIHPIAPLWLMAITPLIALLVVYRQYNDPPLPPVVHQQNRLRLNMLPYLLCALLLAATVSLMQ LGLAPHLSQLFSHSATTVSHHVAILLSIAAGCTLLAQFLVVRPQRFTPPQLLLVAALLMVLGLGLMCVQPLVLFYLGCAL ASFGAAMATPGYQLMLNDRLSTGKGSGVIATSHTLGYGISALMVPVVAKFYGESQLVAAAFMMAILLGGISGWLWCQHRT TAHSVGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| shiF | AAD44744.1 | ShiF | Virulence | SHI-2 | Protein | 5e-66 | 59 |
| imm | NP_839224.1 | membrane transport protein | Not tested | SHI-2 | Protein | 6e-66 | 59 |
| imm | NP_709453.1 | membrane transport protein | Not tested | SHI-2 | Protein | 6e-66 | 59 |
| unnamed | AAD54670.1 | unknown | Not tested | SHI-2 | Protein | 1e-65 | 59 |
| shiF | YP_002414047.1 | putative membrane transport protein, major facilitator superfamily | Not tested | Not named | Protein | 2e-65 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTB3262 | YP_071755.1 | major facilitator superfamily efflux protein | VFG0614 | Protein | 3e-66 | 59 |
