|
Name : tnp (YPTB3201) Accession : YP_071702.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : transposase IS1541 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 3765452 - 3765910 bp Length : 459 bp Strand : - Note : similar to Yersinia pestis YPO3280 tnp; transposase for the IS1541 insertion element (100% evalue=6.E-89) DNA sequence : ATGAGGGATGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCATATAGTTTTTGCGCCGAAGTACCGAAGGCA GGTGTTCTACAGGGAAAAACGCAGAGCGATTGGCAGTATTTTAAGAAAACTGTGCGAATGGAAAAACGTGAATATCCTGG AAGCAGAATGCTGTGTGGATCACATCCATATGCTTCTGGAGATCCCGCCCAAGATGAGTGTCTCGGGATTTATGGGGTAC CTGAAGGGAAAGAGCAGTCTGATGCTTTATGAGCAGTTTGGCGATTTGAAGTTCAAATACCGTAACAGGGAGTTTTGGTG TCGAGGGTATTACGTTGATACGGTAGGGAAAAACACGGCCAGGATACAAGAATACATAAAGCACCAATTGGAAGAGGATA AAATGGGTGAGCAACTCTCGATCCCGTATCCCGGTAGCCCGTTTACGGGCCGTAAGTAA Protein sequence : MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAECCVDHIHMLLEIPPKMSVSGFMGY LKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTGRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 3e-66 | 94 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 7e-43 | 65 |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 4e-46 | 63 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 6e-32 | 55 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 4e-32 | 55 |
