Gene Information

Name : YPTB3136 (YPTB3136)
Accession : YP_071638.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Unknown
Product : bacteriophage protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0847
EC number : 2.7.7.7
Position : 3693012 - 3693713 bp
Length : 702 bp
Strand : +
Note : similar to Vibrio cholerae VC2233 DNA polymerase III, epsilon subunit (28.5% evalue=1.E-09); Salmonella typhi STY4637 exonuclease (45.3% evalue=3.E-38)

DNA sequence :
ATGAATTATTCCTCTAAAGAAATATTTATATCAGCTTATGCCGCAATGAATACACCTGATGACATAACATTACGAAAATT
AAATGATCTCATCAAACCGGCTGATGCTCTTTTTTTGATTTTAGAAAATGAAAAATACAAGGCTAAAGAAGTTGCCCAGT
CTTGGATAAATGGAAATTATCTTATTTTAGATACGGAAACTACTGGCCTTGATAATGCGGCCGAAATTGTGGAAATCAGT
ATTATAGATTGTATGGGCAATGTATTGCTGGATACGCTGATTAAACCTCTCGGTTTTATCCCCTCAGACGTCGAAGCCAT
TCACGGCATTACTAATAAAATGGTGGATAACGCGCCACACTGGTGTGATATTCACGAAAAATTTATCGAGATAATTAAAA
GCAGGAATTTTGTTGCTTATAACTCGCGTTTTGATACCCGGCTTATTTATCAATCTGCGGAGTTTTCAGGCGTCACTACT
GGCGCGGATGATATAGCGTCAGCATCTGGCAATTGTGCGATGTTGGAATATGCCCGATTTCACGGCCAGTGGGATAGCCG
CCAGAGTGATTTTAAATGGCAAACGCTTATTGCCGCCGCTGGGCAAATGAATGTCATTACTGAGGGCGCTTCTCACCGTG
CTTTATCTGATTGTAAAACTACGCTGGGCGTTATTAAAGCCATGGCAGGCGGTGAAATATGA

Protein sequence :
MNYSSKEIFISAYAAMNTPDDITLRKLNDLIKPADALFLILENEKYKAKEVAQSWINGNYLILDTETTGLDNAAEIVEIS
IIDCMGNVLLDTLIKPLGFIPSDVEAIHGITNKMVDNAPHWCDIHEKFIEIIKSRNFVAYNSRFDTRLIYQSAEFSGVTT
GADDIASASGNCAMLEYARFHGQWDSRQSDFKWQTLIAAAGQMNVITEGASHRALSDCKTTLGVIKAMAGGEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4637 NP_458717.1 putative exonuclease Not tested SPI-7 Protein 4e-34 44
t4330 NP_807924.1 exonuclease Not tested SPI-7 Protein 4e-34 44