Gene Information

Name : YPTB3120 (YPTB3120)
Accession : YP_071624.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Virulence
Product : DNA binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3682253 - 3682453 bp
Length : 201 bp
Strand : +
Note : similar to Yersinia pestis YPO0878 regulatory protein (100% evalue=7.E-33); Escherichia coli Z3946 DNA binding protein (59.6% evalue=8.E-16)

DNA sequence :
ATGACCTATTCATCATTAATCCGATTGCCAGAAGTATTAAAACGTACCGGTTTTAGCCGGCCTTGGGTTTATAAATTATT
AAAACAAAAGCGCTTCCCGCCACCGATAAAAATAGGGGGGCGGGCTATCGCTTTTGTTGAAAGTGAGGTGAATGACTGGA
TTGAACAGCAAATTGCACATTCACGGGGAAATAAGCAATGA

Protein sequence :
MTYSSLIRLPEVLKRTGFSRPWVYKLLKQKRFPPPIKIGGRAIAFVESEVNDWIEQQIAHSRGNKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 50
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 50
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 8e-11 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTB3120 YP_071624.1 DNA binding protein VFG1141 Protein 4e-11 50