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Name : gspE (YPTB3064) Accession : YP_071569.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3612942 - 3614453 bp Length : 1512 bp Strand : - Note : similar to Yersinia pestis YPO0815 general secretion pathway protein E (100% evalue=0); Vibrio cholerae VC2732 general secretion pathway protein E (56.7% evalue=1.E-142) DNA sequence : ATGACAGATATTGAGTCTGAGTTCCATACTTTGCCATTAACGTTTAGTTGGTCAAAGAGTCATGGTGTGCTTATTCTGCC TATGGCACAGGGCAGTCAGTTGATTTGTCGTAAATCAGCGACATTGGAGGCTATACTTGAAGGGAATCGGGTGGCTCATA GTCCAATACTTTTTAATTTAGTTACTGATGAAGAGTTTGAAAATAATTTAACTGAACGCTACCAAAATAATTCGGCTGAC CCATATCAGACAATGAGCGTTATCAGCAATGAGATCGACATTTACTCTTTTGCTAACGAATTATCTGACGATGATGATTT ATTGGATATAAATGATGAAGCACCTGTAATAAAATTAATCAATAGCATTCTGGTCGAAGCAATTAAAGAGTTAGCATCTG ATATACACATAGAGTCTTTCGATAAAAAACTTACTGTAAGATTTCGTATTGATGGTGTGTTAAGGAAAATATTGGAATTA CAGCGCCATGTTGCACTATTATTAGTGTCGCGTATAAAAGTCATGGCCAAATTAGATATTGCAGAAAAACGTATTCCACA AGATGGGCGCATAGCTCTAAATTTAGCGGGTAGAGCATTGGATGTTCGTGTTTCGGTATTACCATCTAGCCATGGTGAAC GGGTCGTTATGCGTTTGCTTGACAAAAATAGCATTAAATTGGATTTACCCTCATTAGGTATGTCGAAAGATAACTGTATT TCTATGAATACGCAGGTACATAAACCCCATGGCATTATCTTGGTTGTTGGCCCAACGGGTTCGGGTAAAAGCACTACGTT ATATGCTGCTTTAATGGGGATTGACGCGAATGAGAAAAATATTATGACTGTAGAAGACCCTATTGAGTTCGACATACCTG GTATATCCCAAACGCAAGTAAACCCAAAAATTGAAATGACATTTGCTCGTAGCTTAAGGGCAATATTACGCCAAGATCCT GACGTTATTCTTATCGGTGAAATTCGTGATATTGAAACGGCACAGATAGCGGTCCAAGCTTCTCTAACCGGCCATTTAGT TCTATCTACATTACATGCCAACAGTGCGATAGGTGCAGTGACCAGACTGAAGGATATGAATGTAGAGGCATTTATGCTTT CAAGTTCATTATTGGCCATCATATCTCAGCGGTTGGTTAGAAGATTATGTATAGCGTGTCGCCAAGAGTCGTCAGTGACG GAGAAGGTATTACAACGTCTGAATATTGATGATAAATGCTCTTTGGTTGGTTCGGTGTACCGGGCTAAAGGTTGTAACAA ATGTAATCTTACTGGTTATCGTGGACGTATTGCTCTCCATGAATTTCTCGTAGTGGATAACTTATTGCGGGGGGCTATTT ATAAAGGGCTAGGAGAGTTTGAACTGGCTAAATTGGCCAGTGGGGCTATAAACAGCCTTCTATCTGATGGGATAAGCAAA GTTATTGCAGGGTTAACCACTATAGAGGAACTGGTAAGAATATGCCAAGAGGATGATAATGGCTGTATTTAA Protein sequence : MTDIESEFHTLPLTFSWSKSHGVLILPMAQGSQLICRKSATLEAILEGNRVAHSPILFNLVTDEEFENNLTERYQNNSAD PYQTMSVISNEIDIYSFANELSDDDDLLDINDEAPVIKLINSILVEAIKELASDIHIESFDKKLTVRFRIDGVLRKILEL QRHVALLLVSRIKVMAKLDIAEKRIPQDGRIALNLAGRALDVRVSVLPSSHGERVVMRLLDKNSIKLDLPSLGMSKDNCI SMNTQVHKPHGIILVVGPTGSGKSTTLYAALMGIDANEKNIMTVEDPIEFDIPGISQTQVNPKIEMTFARSLRAILRQDP DVILIGEIRDIETAQIAVQASLTGHLVLSTLHANSAIGAVTRLKDMNVEAFMLSSSLLAIISQRLVRRLCIACRQESSVT EKVLQRLNIDDKCSLVGSVYRAKGCNKCNLTGYRGRIALHEFLVVDNLLRGAIYKGLGEFELAKLASGAINSLLSDGISK VIAGLTTIEELVRICQEDDNGCI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-118 | 54 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-118 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_071569.1 | general secretion pathway protein E | VFG2048 | Protein | 3e-118 | 54 |
| gspE | YP_071569.1 | general secretion pathway protein E | VFG0182 | Protein | 1e-121 | 52 |
| gspE | YP_071569.1 | general secretion pathway protein E | VFG1876 | Protein | 5e-111 | 47 |
| gspE | YP_071569.1 | general secretion pathway protein E | VFG2426 | Protein | 1e-70 | 45 |
