|
Name : nrdE (YPTB2957) Accession : YP_071463.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit alpha Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : 1.17.4.1 Position : 3487533 - 3489683 bp Length : 2151 bp Strand : + Note : Catalyzes the rate-limiting step in dNTP synthesis DNA sequence : TTGGCAACGACAAAACTGAACGTCATCGATTCATCCGACAGTGAGCTGGATTATCACTCACTGAATGCAATGCTGAACCT TTATGATGCTGATGGGCGTATCCAGTTTGATAAAGACCGGCTGGCCGCACGGCAATACTTTTTGCAGCACGTTAATCAAA ACACGGTGTTCTTCCATAATCTACAGGAAAAAATTGATTACCTGATTGAGGAGGGATATTACGAAAAAGAGGTTCTGGAT CAATACGATTTTAGCTTTATCAAAAGTCTATTCCAGCAAGCCTATAGCAAAAAATTTCGTTTCCCCACTTTTCTCGGGGC GTTTAAATATTACACCAGCTACACCCTAAAAACCTTTGATGGCAAACGTTACCTGGAACGCTATGAAGATCGCGTTTGCA TGGTCGCACTGACACTGGCTACAGGTAACCAGACACTGGCGCGGGAACTGGTAGAAGAAATTATCTCTGGCCGCTTCCAA CCCGCCACACCAACCTTCCTCAATTGTGGCAAAAAACAACGTGGTGAACTGGTCTCCTGCTTCCTGTTGCGTATCGAAGA CAATATGGAATCCATTGGCCGCTCGATTAACTCGGCACTGCAACTCTCTAAACGTGGCGGAGGCGTGGCGTTCCTCCTCA GCAATATCCGTGAGGTGGGTGCTCCCATCAAACGGATTGAAAATCAGTCTTCGGGTGTTATCCCGATAATGAAAATGTTG GAGGACGCGTTCTCCTATGCCAATCAGTTGGGTGCCCGTCAGGGGGCTGGGGCGGTCTATCTCCATGCCCATCATCCAGA TATTTTGCGTTTTCTGGATACCAAGCGGGAAAATGCCGATGAAAAAGTACGGATTAAGACCTTATCGTTGGGGGTGGTGA TACCGGATATCACTTTTGAACTGGCGAAGAATAATGAAGAAATGTACCTGTTTTCACCTTATGACATTGAACAGGTTTAC GGCGTGCCTATGTCTGAAATCAGCATCAGCGAAAAATACCGCGAAATGGTGGATAACAAACGCATCCGCAAAAGCAAAAT TAAAGCCCGCGAGTTCTTCCAAATTCTGGCTGAGATCCAATTTGAATCTGGCTACCCTTATATGATGTTTGAAGATACGG TTAATCGCGCTAATCCGATTAAAGGCCGGATTAATATGAGTAATTTGTGTTCGGAAATTTTGCAGGTCAACGCCCCCACT GAATACCACGAAGACCTCAGCTATCGCCATATCGGGAAAGATATCTCCTGTAATCTTGGCTCGCTGAATATCGCGCAGGT GATGGATTCACCCGATTTTGGTAAATCCATTGAGATCGCCATTCGTGGGCTCACTGCCGTATCTGAAATGAGCAATATTC GCTCAGTGCCATCCATTGAAAAAGGCAATCAAGAATCACATGCCATTGGCCTTGGGCAGATGAACCTGCACGGTTATCTG GCGCGGGAGCGTCTTTTTTACGGCTCGGAAGAGGCGTTGGATTTTACCAATATCTATTTTTATACCGTGGCGTATCACGC GATCCGTGCCTCAAACCAGTTGGCAATAGAACGGGCCAGCCATTTCAAAGGCTTCGATGAATCAGATTATGCTTCGGGTG CTTTCTTCAGCAAATATATCGAGCAAAGCTGGCAGCCAAAAACAGCAAGAGTACAGGCACTGTTTGCCGATGCCGGTATT GCCATACCAAACCAACAAGATTGGATCGCGCTACGGCAATCCGTTATGGAACACGGTATTTATAATCAGAACCTACAGGC GGTGCCACCAACAGGCTCTATTTCCTATATCAATCATTCGACATCAAGTATCCACCCGATTGTCTCTCCGATTGAGATCC GTAAAGAAGGCAAAATAGGCCGTGTTTATTATCCCGCACCCTATATGACCAACGATAACCTTGAATATTATCAAGATGCC TACCAGATCGGGCCTGAAAAAATCATCGATACCTATGCCGCAGCGACCCAACATGTTGATCAGGGCCTCTCTCTGACGCT GTTCTTCCGTGATACCGCTACCACCCGCGATATTAACAAAGCACAGATTTACGCTTGGAAGAAAGGGATCAAGACCATTT ATTACATCCGGCTACGTCAGATGGCATTAGAGGGAACCGAAGTCGAGGGCTGCGTTTCCTGTTCGCTGTAA Protein sequence : MATTKLNVIDSSDSELDYHSLNAMLNLYDADGRIQFDKDRLAARQYFLQHVNQNTVFFHNLQEKIDYLIEEGYYEKEVLD QYDFSFIKSLFQQAYSKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERYEDRVCMVALTLATGNQTLARELVEEIISGRFQ PATPTFLNCGKKQRGELVSCFLLRIEDNMESIGRSINSALQLSKRGGGVAFLLSNIREVGAPIKRIENQSSGVIPIMKML EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKVRIKTLSLGVVIPDITFELAKNNEEMYLFSPYDIEQVY GVPMSEISISEKYREMVDNKRIRKSKIKAREFFQILAEIQFESGYPYMMFEDTVNRANPIKGRINMSNLCSEILQVNAPT EYHEDLSYRHIGKDISCNLGSLNIAQVMDSPDFGKSIEIAIRGLTAVSEMSNIRSVPSIEKGNQESHAIGLGQMNLHGYL ARERLFYGSEEALDFTNIYFYTVAYHAIRASNQLAIERASHFKGFDESDYASGAFFSKYIEQSWQPKTARVQALFADAGI AIPNQQDWIALRQSVMEHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSPIEIRKEGKIGRVYYPAPYMTNDNLEYYQDA YQIGPEKIIDTYAAATQHVDQGLSLTLFFRDTATTRDINKAQIYAWKKGIKTIYYIRLRQMALEGTEVEGCVSCSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 0.0 | 76 |
