Gene Information

Name : ecpD (YPTB2373)
Accession : YP_070888.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Virulence
Product : chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2797833 - 2798612 bp
Length : 780 bp
Strand : -
Note : similar to Yersinia pestis YPO1708 ecpD; chaperone protein (100% evalue=1.E-141); Escherichia coli Z0151 ecpD; fimbrial chaperone protein (41.1% evalue=4.E-48)

DNA sequence : 
ATGCGCAGAACGCTCCTTACTATATTGTCCTTTTTAAGGACAGTGCGACTCTTAACGACACTGACACTCTTAATATTATC
GGTTGTGGCGACTGTGGCTCGTGCTGAAGTGATGATCAGTGGGACACGTGTTATTTATGAAGAGAAACAACGTGAGGGGG
TGGTAAAGGTTTCCAATACGGGCGATATGCCGGTCCTGCTTCAGGCCTGGATAGATAAAGGTGATGCGAACGCACGCCCA
GAGGCTATCAAGGTGCCGTTTAGTGTAACCCCCCCAGTAGTACGTTTAGACCCTAAAAGGGATCAGACTATTCGTCTTTT
TCGCACTGATGGTGGATTAGCGGCTGATCGTGAAACCCTATTTTGGTTTAACTTATTAGAAGTCCCGCCAAAGCCAATCC
AAAGTGCGGCTGGTGGTGAGAACAAAATGCAATTGGCTTTCCGTACCAGAATTAAAATGTTTTACCGCCCTGAAGGATTA
ACCGTATTACCTGCGCAAGCGGCCAAGAGTCTCGCATTTTCAATGAAAGGCAATCAGATCGTCATAAAGAATGCCTCACC
GTATTACATTACCTTGAGAAAGCTAGAATTACGCACGTCAGAGAAAGGGCCTGTATTGGCTAATTTTACTAAAATCAATA
ATAAAATGGTTGCCCCTTTTAGTGAACTAAGCTTACCTACGAGTGCAAAAGCATCGATCAATAATTCGGCACAAGTTTTT
TATTCTGTTATTAATGATCAGGGCGGCGAAACTCAAGGTACGCAAAAACTGACCCAATAA

Protein sequence : 
MRRTLLTILSFLRTVRLLTTLTLLILSVVATVARAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARP
EAIKVPFSVTPPVVRLDPKRDQTIRLFRTDGGLAADRETLFWFNLLEVPPKPIQSAAGGENKMQLAFRTRIKMFYRPEGL
TVLPAQAAKSLAFSMKGNQIVIKNASPYYITLRKLELRTSEKGPVLANFTKINNKMVAPFSELSLPTSAKASINNSAQVF
YSVINDQGGETQGTQKLTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 2e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ecpD YP_070888.1 chaperone protein VFG0007 Protein 2e-38 43
ecpD YP_070888.1 chaperone protein VFG1145 Protein 3e-33 42