|
Name : sepC (YPTB2294) Accession : YP_070809.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : insecticial toxin Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 2705571 - 2708519 bp Length : 2949 bp Strand : - Note : similar to Yersinia pestis YPO2380 sepC; insecticial toxin (99.4% evalue=0) DNA sequence : ATGAACACATCACTATTCAGTAAAACCCCGGCGGTCACGGTCCTCGACAACCGTGGGCTGTCCGTGCGCAGCATCGCGTA CCATCGCCATCCCGACTCGCCGGATGACACTGGTGAGCGTATCACCCATCACCAGTATGATGCCCGTGGTTTCCTCACGC AAAGCGCCGATCCCCGCCTGCACGACACTGGTCGGGCGAACGTCAAGTACCTGTCGGACCTGGTCGGAAACGCCCTGTGT ACCGTCAGCGCCGATGTTGGTACCACTGTAGCTCTGAACGATGCCGCCGGTCGGCTATTTATGACAGTCAGTAATATTGA CACCGCTGACGACGATCTGGAGGACAGAAGCCAGGCGGTGAACCGTACCTGGCAGTATGAGGGTGCCTCACTGCCGGGAC GCCTGCTGAGCATTACAGAGCAGGTCACTGGTGAAGCCGCCCGCGTCACCGAGCGTTTTACGTATGCCGCCAACACGGAC GAGAAAAAAGCCCTGAACCTGGTCGGACAGTGCGTCAGCCACTACGACACAGCAGGTCTGAGGCAGATGGACAGTATTGC CCTGACCGGTGTGCCACTCTCCGTCACCCGCCGCTTGCTGAAGGATGCGGACAACCCGGATACCGTGGCAAACTGGCAGG GTGAGGACAGCTCCGCCTGGAATGACCAGTTGGCAGCAGACAGGCTAACCACTCTGACGACTGCGGACGCTATCGGCGCG GTGCTAACCACCACCGATACAAAAGGCAACGTGCAGCGGGTGGTGTACAACGTGGCAGGCCTGCTGTCGGGCAGTTGGCT GAGGGTGAAAGGTGGCGCGGAGCAGGTTATCGTTCAATCGTTGACGTACTCGGCAGCCGGGCAGAAGCTGCGCGAGGAGC ACGGTAACGGCGTGGTGACCACGTACACATACGAGCCGGAGACGCAACGCCTGACCGGCATCCGGACGGAGCGGTCAGCC GGACATGCATCCGGAACGAAGGTGCTTCAGGACTTGCGCTATGAGTATGATCCCGTGGGCAACGTGCAGAGCATCAGAAA CGACGCAGAAGAAACCCGCTTCTGGCGCAACCAGAAAGTGGTGCCGGAGAATACGTATGTCTACGACAGCTTGTACCAGT TGGTCAGCGCCACCGGGCGCGTGATGGTGAACGCCGGACAGCAGGGCCGCAGCCTGCCTTCCGCCACCCTTCCTATAGAG AGTTCCGCATATACAAACTACACCCACACCTATACCTACGATACCGCGGGTAACCTGACGCAGATCCGACACACCCCGGC AACCGGCAGTGGTCACACAACGGATATCACGGTCAGCGACCGCAGCAACCAGGGCGTGCTGAGCACACTGACCACAAATC CGGCAGAGGTTGACGCTCTGTTCACGGCAGGCGGCCAGCAGAAACAGCTACAGCCAGGACAGCATCTTATCTGGACAGCG CGTAACGAGCTGCTGAAGGTGACGTCGGTGGTACGGGACGGAGACAGCGATGACAGGGAAAGCTACCGTTATGACGGAAA CAGCCAGCGCATCCTGAAGGTCAGCGTGCAGAAAACGGGAGGCAGCACGCAGACGCAGCGGGTTATGTACCTGCCGAGGC TGGAACTGCGTAGCACAGCCAGCGGCGTGACAGAAACGGAAAGCCTGCAGATTATCACTGTCGGTGAGGCGGGCCGGGCG CAGGTGCAGGTGCTGCATTGGGAAAAGGGCAAGCCGGACGCTATCGATAATGACCAACTGCGCTACAGCTATGACAACTT GATCGGCAGCAGTACGCTTGAGGTGGATGGGGATGGCAATGTTATCTGCATGGAGGAATACTACCCGTACGGCGGCACGG CGGTGTGGACAGCGCACAGCCAGACGGAAGCAGACTACAAAACGATCAGATACTCAGGGAAGGAACGCGATGCGACGGGG TTGTACTACTATGGCTGGCGTTATTACCAACCTTGGGTGGGGCGCTGGCTCTCCGCAGATCCGGTGGGAACAGTGGACGG ACTGAACCTGTATTTGATGGTAGGAAATAACCCAACATCCTTCCATGACAGTAATGGCTTGATACGTGAAGGACAGAGTG CAAGGAAATTAGTGGGGGAAGCCTTTGTGCATCCTTTACATATGTCGGTGTTTGAACGCATATCCATTGAAGAGAATATG GCAATGAGCGTAAGGGAAGCGGGTATTTATACTATTTTAGCACTGGGTGAAGGTGCAGCAGCAAAAGGCCATAATATTCT TGAGAAAACAATTAAACCCGGATCCCTGAAGGCTGTCTATGAGAATAAGGCCGGAGCTGCTCTTGAACTGGCAAAAAATA GTGGTTTTATTGGCCGGGTTGGCCGGTGGAATGCGTCTGGTGTGCAGGGGGTTTATGCGTACAACAGACCAAGCGGGGAG GATTTGGTTTATCCTGCCAGCCTGCAGGATACTTCTGATAATGAATTAGTGAATGCATGGATAAAACATAAGATAATCAC GCCTTATACTGGGGATTATGACATGCACGATATTATTAAATTCAATCGTGGAAAAGGGTATGTGCCCACCGCGGAAAGCG CTGAGGAAACAGGAGTAAAAGACCTAATTAATAAAGGCGTTGCAGAAGTCGATCCCGCCCGGCCTTTTGAGTATACAGCG ATGAATGTCATTCGCCATGGGCCTCAGGTAAACTTTGTTCCTTACATGTGGGAATATGAACACGATAAAGTTGTTAGCGA TAATGGCTATCTGGGGGTAGTTGCGCGTCCAGGTCCATTCCCGATAGCAATGGTACATCAGGGGCAATGGACTGTTTTTG ACGACAGTAAAGAGCTGTTTAACTTTTACAAATCGAGTAATACTCCGCTACCAGAACACTGGCAACAGAATTTTATTGCA AGAGGCCCTGGTATAGTTGCAACTCCGCGGCATGCTGACGTTCTTGATAAACGACGAATCATGCATTAA Protein sequence : MNTSLFSKTPAVTVLDNRGLSVRSIAYHRHPDSPDDTGERITHHQYDARGFLTQSADPRLHDTGRANVKYLSDLVGNALC TVSADVGTTVALNDAAGRLFMTVSNIDTADDDLEDRSQAVNRTWQYEGASLPGRLLSITEQVTGEAARVTERFTYAANTD EKKALNLVGQCVSHYDTAGLRQMDSIALTGVPLSVTRRLLKDADNPDTVANWQGEDSSAWNDQLAADRLTTLTTADAIGA VLTTTDTKGNVQRVVYNVAGLLSGSWLRVKGGAEQVIVQSLTYSAAGQKLREEHGNGVVTTYTYEPETQRLTGIRTERSA GHASGTKVLQDLRYEYDPVGNVQSIRNDAEETRFWRNQKVVPENTYVYDSLYQLVSATGRVMVNAGQQGRSLPSATLPIE SSAYTNYTHTYTYDTAGNLTQIRHTPATGSGHTTDITVSDRSNQGVLSTLTTNPAEVDALFTAGGQQKQLQPGQHLIWTA RNELLKVTSVVRDGDSDDRESYRYDGNSQRILKVSVQKTGGSTQTQRVMYLPRLELRSTASGVTETESLQIITVGEAGRA QVQVLHWEKGKPDAIDNDQLRYSYDNLIGSSTLEVDGDGNVICMEEYYPYGGTAVWTAHSQTEADYKTIRYSGKERDATG LYYYGWRYYQPWVGRWLSADPVGTVDGLNLYLMVGNNPTSFHDSNGLIREGQSARKLVGEAFVHPLHMSVFERISIEENM AMSVREAGIYTILALGEGAAAKGHNILEKTIKPGSLKAVYENKAGAALELAKNSGFIGRVGRWNASGVQGVYAYNRPSGE DLVYPASLQDTSDNELVNAWIKHKIITPYTGDYDMHDIIKFNRGKGYVPTAESAEETGVKDLINKGVAEVDPARPFEYTA MNVIRHGPQVNFVPYMWEYEHDKVVSDNGYLGVVARPGPFPIAMVHQGQWTVFDDSKELFNFYKSSNTPLPEHWQQNFIA RGPGIVATPRHADVLDKRRIMH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 0.0 | 61 |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 7e-172 | 59 |
| TccC5 | AAO17210.1 | TccC5 | Virulence | tcd island | Protein | 5e-171 | 56 |
| tccC | CAI77380.1 | putative insecticidal toxin complex protein | Not tested | tc-PAIYe | Protein | 1e-135 | 50 |
