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Name : nifJ (YPTB2253) Accession : YP_070768.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : pyruvate-flavodoxin oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 2659437 - 2662970 bp Length : 3534 bp Strand : + Note : similar to Yersinia pestis YPO2334 nifJ; pyruvate-flavodoxin oxidoreductase (99.9% evalue=0); Escherichia coli b1378 ydbK; pyruvate ferredoxin oxidoreductase (80.5% evalue=0) DNA sequence : ATGATTACGACTGACGGCAACAGCGCAGTGGCTTCTGTGGCCTATCGTGCCAGCGAAGTTATTGCTATCTACCCCATTAC CCCCAGTTCTACGATGGCAGAGCAAGCCGATGCTTGGTCAGGTGACGGCAAAGTGAACATCTGGGGCGATGTGCCGCGGG TGGTCGAAATGCAGTCCGAAGGGGGGGCTATCGCCACGGTTCATGGGGCATTGCAAACTGGCGCATTATCCACCTCCTTT ACCTCCTCGCAGGGATTGTTATTAATGATCCCAACACTGTACAAACTGGCTGGCGAATTAACACCATTTGTACTTCATGT TGCAGCCCGGACAATTGCTACCCATGCATTATCCATCTTTGGTGACCATTCCGATGTGATGGCGGTACGCCAAACAGGCT GCGCCATGTTATGCGCCAGTAGCGTACAGGAGGCTCAGGATTTTGCCCTGATTTCACAGATTGCCACCCTGAATAGCCGA ATTCCCTTTATCCATTTCTTTGATGGTTTTCGCACCTCGCATGAAATCAACAAAATAGAGCCACTCAGTGACGAGACGTT GCGCCAGTTATTGCCTCAAGCAGGGATTAATGCGCACCGGAGCCGGGCTCTTTCGCCAGATCACCCGGTGGTACGCGGCA CCTCAGCCAATCCAGATACCTATTTCCAGTCACGGGAAGCCACTAACCCTTGGTATAACAATACCTATCAGCATGTTGCG GATGCCATGCAGGCATTTGCTGAAGCCACTGGGCGTGAATATAAACCGTTTGAATATTACGGCCATCCACAAGCTGACCG TGTCATTATTTTAATGGGTTCCGCTATCGGTACCTGCGAAGAGGTTATTGACACCTTGCTCACTCGAGGGGAGAAAGTCG GTGTGCTAAAAGTACGCTTATTTCGCCCCTTCTCCGCACAGCATCTGCTTGCGCTCTTGCCCGCGTCGGTCGGCAAAATT GCGGTTTTGGATCGCACCAAAGAGCCTGGCGCATTAGCTGAACCCCTGTATTTGGATGTAATGACGGCATTAGCTGAAGC TTATAGCCGTGGTGATCGTGATACATTGCCAAAAGTCATTGGGGGACGCTATGGCTTATCCTCCAAAGAATTTGGCCCCC ATTGCGTATTGGCCATTTTCAGAGAGCTGTCATTAGACTTACCACGCCCCCGGTTTACGGTTGGAATTTTTGATGATGTG ACCGGCCTATCGTTGCCCCTAAGCGACGAAAAAATTGAATCGCGCGCAACATTGGAAGCCCTATTTTATGGCCTGGGAAG TGATGGTTCAGTCTCTGCCACCAAGAATAACATCAAGATTATCGGCAACAGCACCGCACTCTACGCTCAAGGTTATTTTG TTTACGATTCGAAGAAGGCTGGAGGCCTGACGGTCTCACATCTACGCGTAAGCCAGACGCCGATTAACTCAGCCTATCTG GTTAGCCACGCCGATTTTGTCGGCTGCCACCAGCTACAGTTTATCGATATTTATCAAATGGCTGAACGCCTTAAACCCGG AGGGATATTCTTACTCAATACCCCCTTCAGCGCGGATGAGATGTGGCCACGTTTGCCACAAGACGTTCAGGCAGTATTGC ATCAGCGCCATGCCCGTTTGTTTGTGATCAATGCTGCGAAAATTGCCCGTGAATGCAAACTCGGTGCCCGCATCAATACC GTCATGCAGATGGCCTTCTTCCATCTGACACAGATTCTGCCAACGGCCATGGCACAAGAGCAATTACGGGCCGCGATTGA ACGCAGTTACAGCAATAAAGGGGCAGAAATTGTCACCCGCAACTGGCAGGCACTGGATGCAACTCTCGAAGCCTTAATTG AGATCCCGCTGCAACCTATTGACGAAAACAGCCCTGTACGCCCACCGATTGTTTCAGACCAAGCGCCCGATTTCGTTAAA ACCGTTACGGCAACCATGCTGGCAGGCTTGGGTGATACGCTGCCGGTATCGGCCTTCCCGCCCGATGGCACCTGGCCTGT CGGTACCACCCAATGGGAAAAACGCAATATTGCAGAAAACATCCCCATCTGGCAGCCAGACCTTTGTACACAATGTAATC ACTGTGTCGCTGCCTGCCCACACTCGGCTATCCGTGCCAAAGTGGTACAACCTGAGGCCATGGCCGGTGCGCCGGACAGC TTACAGTCACTGGATGTTAAAGCCCGTGATATGCGTGGGCAGAAATATGTCTTACAAGTGGCGCCCGAAGATTGTACTGG CTGCAACCTGTGTTATGAAGTCTGCCCTGCCAAAGATCGCCAAAATCCAGAAATCAAAGCGATTAACATGCGGCCGCGTC TGGAACACCGGGCGGTAGAAAAAGCACATTATGATTTCTTCCTCAAGCTGCCTGAAATCGATAAAACACAAATGGAACGT ATCGATATCCGGACTTCACAATTGATTTCACCGCTGTTCGAATATTCCGGAGCCTGCTCCGGTTGTGGTGAAACACCGTA TATCAAATTGTTGACCCAGTTGTATGGCGATCGTCTGCTCATTGCCAATGCCACCGGTTGCTCTTCGATCTATGGCGGTA ACCTGCCTACCACGCCATACACCACCAATGCCGATGGCCGTGGGCCTGCATGGGCAAACTCATTGTTCGAAGATAATGCG GAGTTTGGTTTAGGCTTTCGCCTAACCGTCGATCAGCATCAAAAACGTGTTACCCGGCTGATCCAACAGCTAGCACCTCA ACTGCCGGATGAGTTGGTCAATCAACTTATCAATCAGGAATACACCCCAGAAGAGCGGCGTAAGCAAGTCTCACAATTGC GTCAGTTGTTACGTGAGATACCAGGCAATGATGCACAACAGTTAGCAGCAGACGCCGACTATCTGGTGGATAAATCTATC TGGCTGATTGGCGGTGATGGCTGGGCATATGACATCGGTTTTGGCGGTTTGGACCATGTCCTGAGCCTGACAGAAAATGT CAATGTGCTGGTACTGGACACCCAGTGCTATTCCAATACCGGTGGTCAGCAATCCAAGGCGACTCCCCTCGGTGCGGTCA CCAAATTTGGTGAACACGGTAAACGCAAAGCGCGCAAAGATTTGGGCGTCAGTATGATGATGTATGGCCACGTCTATGTG GCACAGATCTCTATTGGGGCACAGCTCAATCAGACGGTGAAAGCCATTCAGGAAGCAGAAGCCTATCCCGGCCCGTCACT GATTATTGCTTACAGCCCTTGTGAGGAACACGGTTACGATTTGGCATACAGCCATGACCAAATGAAGCAATTGACGGCCA CCGGTTTCTGGCCATTGTATCGCTTTGACCCGCGCCGCGCCGATGAAGGCAAAACCGCGTTAGCACTGGATTCACGCCCA CCAAGCAGTGACTTGACCACCACACTGCTTAATGAGCAACGTTTCCGCCGGTTAAATACGCAAGAACCCGCCGTTGCCGC CCAGTTATATGCCGAGGCTGAAAAAGATCTGAAAAAACGCTATGACTTCTTGAGTTTACTCGCTGGCAAAACGGAAAAAA CGCCTTCGGAATAA Protein sequence : MITTDGNSAVASVAYRASEVIAIYPITPSSTMAEQADAWSGDGKVNIWGDVPRVVEMQSEGGAIATVHGALQTGALSTSF TSSQGLLLMIPTLYKLAGELTPFVLHVAARTIATHALSIFGDHSDVMAVRQTGCAMLCASSVQEAQDFALISQIATLNSR IPFIHFFDGFRTSHEINKIEPLSDETLRQLLPQAGINAHRSRALSPDHPVVRGTSANPDTYFQSREATNPWYNNTYQHVA DAMQAFAEATGREYKPFEYYGHPQADRVIILMGSAIGTCEEVIDTLLTRGEKVGVLKVRLFRPFSAQHLLALLPASVGKI AVLDRTKEPGALAEPLYLDVMTALAEAYSRGDRDTLPKVIGGRYGLSSKEFGPHCVLAIFRELSLDLPRPRFTVGIFDDV TGLSLPLSDEKIESRATLEALFYGLGSDGSVSATKNNIKIIGNSTALYAQGYFVYDSKKAGGLTVSHLRVSQTPINSAYL VSHADFVGCHQLQFIDIYQMAERLKPGGIFLLNTPFSADEMWPRLPQDVQAVLHQRHARLFVINAAKIARECKLGARINT VMQMAFFHLTQILPTAMAQEQLRAAIERSYSNKGAEIVTRNWQALDATLEALIEIPLQPIDENSPVRPPIVSDQAPDFVK TVTATMLAGLGDTLPVSAFPPDGTWPVGTTQWEKRNIAENIPIWQPDLCTQCNHCVAACPHSAIRAKVVQPEAMAGAPDS LQSLDVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAKDRQNPEIKAINMRPRLEHRAVEKAHYDFFLKLPEIDKTQMER IDIRTSQLISPLFEYSGACSGCGETPYIKLLTQLYGDRLLIANATGCSSIYGGNLPTTPYTTNADGRGPAWANSLFEDNA EFGLGFRLTVDQHQKRVTRLIQQLAPQLPDELVNQLINQEYTPEERRKQVSQLRQLLREIPGNDAQQLAADADYLVDKSI WLIGGDGWAYDIGFGGLDHVLSLTENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGEHGKRKARKDLGVSMMMYGHVYV AQISIGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAYSHDQMKQLTATGFWPLYRFDPRRADEGKTALALDSRP PSSDLTTTLLNEQRFRRLNTQEPAVAAQLYAEAEKDLKKRYDFLSLLAGKTEKTPSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 46 |
