Gene Information

Name : YPTB1864 (YPTB1864)
Accession : YP_070390.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Unknown
Product : Orf81 bacteriophage 186
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0847
EC number : -
Position : 2212145 - 2212798 bp
Length : 654 bp
Strand : -
Note : similar to Salmonella typhi STY4637 exonuclease (54.4% evalue=3.E-45); C. muridarum TC0532 DNA polymerase III, epsilon subunit, (30.8% evalue=4.E-10)

DNA sequence :
ATGAAAAATAATAAATTAGCTAAAGCCATTGAAGCATTTATTGCCGCAGTGAAAAAAACTGGCTTTAAAATCTATCAGGC
TTTATGCCGCTACGGCGCACATAATCGTGCTAACAGATGGTTGAAACGTAATTATCTTATTCTGGATACAGAAACAACGG
GCCTTGGTAATGATGCTGAAATAATTGAAATCAGTATCATTGATTGTACTGGAAAGATATTACTGGATACGCTTGTTAAG
CCATTAAAAGCCATTCCCGCAGAGGTAACCGCCATTCATGGAATTACTAATGAAATGGTGGCTGATGCACCAACGTGGCG
AGATATTCATTATCAATTCATGACGCTGACGAATGACCGTACTCTGCTTATTTACAATGCACTATTTGACTCTCGTTTAA
TTTTTCAAACGGCGGCTGCTAATAATTGCCCGGTGCCAGAGAAAAAATATATTTTTGATGCCGAGTGCGTTATGGAAAGT
TACGCCAAATATTACGGCCAGTGGGATCAGAAGCGGAATAAGTTTAAATGGCAACGGTTGAGTAATGCAGCCGAGCAACA
AGGCGTTGTTATTGATGGTGTCGCACACCGTGCGCTTGCCGATTGCAAAACAACGCTAGGTATTATCCGCGCTATGGCGG
GGGTGAAGTCATGA

Protein sequence :
MKNNKLAKAIEAFIAAVKKTGFKIYQALCRYGAHNRANRWLKRNYLILDTETTGLGNDAEIIEISIIDCTGKILLDTLVK
PLKAIPAEVTAIHGITNEMVADAPTWRDIHYQFMTLTNDRTLLIYNALFDSRLIFQTAAANNCPVPEKKYIFDAECVMES
YAKYYGQWDQKRNKFKWQRLSNAAEQQGVVIDGVAHRALADCKTTLGIIRAMAGVKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4637 NP_458717.1 putative exonuclease Not tested SPI-7 Protein 1e-35 55
t4330 NP_807924.1 exonuclease Not tested SPI-7 Protein 1e-35 55