Name : YPTB1859 (YPTB1859) Accession : YP_070385.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : gpP phage P2 terminase Function : - COG functional category : S : Function unknown COG ID : COG5484 EC number : - Position : 2204649 - 2206412 bp Length : 1764 bp Strand : + Note : similar to Salmonella typhi STY4627 probable terminase subunit (63.8% evalue=0); Salmonella typhimurium STM2722 Fels-2 prophage: similar to gpP, ATP charging, in phage P2 (63.7% evalue=0) DNA sequence : ATGGAAAGCGTTTCTATCAATGCCGATTTAGATCCCCGCCGTCAAGCCATGTATCTGTATTGGCAAGGGCTGCGTATTGC CCGGATTGCGGAAATGATCGGTGAGAAAGCCGTCACGGTACACAGTTGGAAGCGCCGCGACAAGTGGGACGCTTACGGGC CATTGGATCAGATGCAACTGACCACGGCAGCGGAATATTGCCGACTTGTCATGAAATCAGCCAAGGAACCCAAAGACTAC AAAGAGATTGATTTGCTGGGCCGGCAAGCCGAACGCCACGCCCGGATCGGTAAATACAATGATGGCGGCAATGAGGCCGA TCTCAACCCTAACATTGAGAAGCGCAACAGCGGAACACGTAAGGCACCCCAGAAAAATGTATTCAGTGAGGCGCAGGTTG CCAAGCTGAAAGATATTTTCAATGAATCCATGTTCGACTATCAGCGCAACTGGTATGAAGCCGGTTTATCGCCTGATTTC CGTATTCGTAACTTCTTAAAATCCCGCCAAGTCGGTGCAACCTACTTTTTCTCATGGGAAGCGCTGCTTGATGCCCTCGA CACTGGCCGCAACCAGATGTTTGTTTCCGCCTCCAAAGCGCAGGCGCACCAGTTTAAAAACTATATTGTCGCCGCCGCAC GTCAGGTGGATGTTGATTTGCGCGGTGAGGTGATTATTTTACCCAATGGCGCGGAAATGCACTTTCTCGGTACCAACGCC AGCACCGCACAGGGCCGCCCCGGCAATCTCTATCTGGATGAATATTTTTGGATACCCGGCTTTCAAAAATTGCGCCGAGC CGCATCGGGCATGGCATCGCAGAAAAGATACCGCTCCACCTATTTTTCTACTCCGTCCAGCACCTCACATGAGGCTTATC CGTTCTGGGCGGGCACGCTGTTTAACAAAGGTAAAGCCAAAGATAAACGCATTGAAATTGATGTCAGCTACCCACGGCTG GCCGGAGGCCGGTTATGTGAGGATAAGCAGTACCGCCAGATTGTCACTATTGAGGATGCACTGAAAGGTGGCTGCGACCT GTTTGATATTGATGAGTTACGCAATGAAAACAGCGATCAAGATTTTGAAAACCTGTTTATGTGCGGCTTCATTGACGATA ACGCTTCCACGTTCAAACTTGCAGAAATGCAGCGCTGCATGGTGGATAGCTGGGAAAAATGGACAGACGTCAAATTGCTG GCGCTACGCCCATTTGGTGATAGGCCGGTGTGGATTGGCTACGACCCGGCCAGCACCGGCGATAGTGCGGGTTGCGCCGT CATTGCACCGCCAGTGGTGGCGGGCGGTAAGTTCAGGGTATTGGAGCGCCACCAGTGGAAAGGGATGGATTTTGCCGATC AAGCCAGCAATATCAAAAAGATCACTGAGCGCTATAACGTCACCTATATCGGCATTGATGATACCGGTCTGGGCCGTTCC GTGACGCAATTAGTACGGCAATTCTTCCCGGCAGTGAACGCCATTCACTACAGCCTGGAAATGAAAGCCGACCTCATTTA TAAGGCAAAAAATATCATTCATGGCGGCCGTCTGGAGTTTGATGCGGGCTGCATTGATATCGCCACCGCATTTATGTCTA TCCGCAAAACCATGACCGCCACTGGGCGAAACGCCACTTTTGTTACTAGCAGATCTGAGGGCGTCAGTCACGGCGACGTG GCATGGGCCATTATGCACGCCTTATTCCATGAGCCTCTTGAGGGCATTAACAGCAATAACACCAGTGTGATGGAGATATA TTGA Protein sequence : MESVSINADLDPRRQAMYLYWQGLRIARIAEMIGEKAVTVHSWKRRDKWDAYGPLDQMQLTTAAEYCRLVMKSAKEPKDY KEIDLLGRQAERHARIGKYNDGGNEADLNPNIEKRNSGTRKAPQKNVFSEAQVAKLKDIFNESMFDYQRNWYEAGLSPDF RIRNFLKSRQVGATYFFSWEALLDALDTGRNQMFVSASKAQAHQFKNYIVAAARQVDVDLRGEVIILPNGAEMHFLGTNA STAQGRPGNLYLDEYFWIPGFQKLRRAASGMASQKRYRSTYFSTPSSTSHEAYPFWAGTLFNKGKAKDKRIEIDVSYPRL AGGRLCEDKQYRQIVTIEDALKGGCDLFDIDELRNENSDQDFENLFMCGFIDDNASTFKLAEMQRCMVDSWEKWTDVKLL ALRPFGDRPVWIGYDPASTGDSAGCAVIAPPVVAGGKFRVLERHQWKGMDFADQASNIKKITERYNVTYIGIDDTGLGRS VTQLVRQFFPAVNAIHYSLEMKADLIYKAKNIIHGGRLEFDAGCIDIATAFMSIRKTMTATGRNATFVTSRSEGVSHGDV AWAIMHALFHEPLEGINSNNTSVMEIY |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
t4322 | NP_807916.1 | terminase subunit | Not tested | SPI-7 | Protein | 0.0 | 64 |
STY4627 | NP_458709.1 | probable terminase subunit | Not tested | SPI-7 | Protein | 0.0 | 64 |
unnamed | ABR13464.1 | predicted ATPase terminase subunit | Not tested | PAGI-6 | Protein | 8e-162 | 59 |