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Name : YPTB1857 (YPTB1857) Accession : YP_070383.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : major capsid protein Function : - COG functional category : - COG ID : - EC number : - Position : 2202571 - 2203626 bp Length : 1056 bp Strand : - Note : Bacteriophage PhiD5; similar to Salmonella typhi STY4625 major capsid protein (62.4% evalue=1.E-124); Salmonella typhi STY3677 major capsid protein (63% evalue=1.E-124) DNA sequence : ATGAAAAAAACCACCCGATTAAAGTACAACCAGTACCGCCAGCAGGTTGCTAGCCTGAACGGTTTGGACAATAAAGAGGA TATCAGCGCGAAATTTACCGTTGAGCCGTCTATTGCGCAAAAACTGGAAACCAAACAACAGGAGAGCAGTGTTTTCCTGT CCAAAATCAACATGTATCCAGTGGATGAGAAGGAGGGTGAAAAGGTTGGCTTAAGTATTGACCGCCCGATTGCCAGCACC ACAGATACCACGCAGAAAGAACGTGAAGCATCAGACCCTAGCGGTCTGGATGGGACAAAATACAACTGTACCCAGACTAA CTTTGATACCGCGCTGCCTTATATCAAATTGGATATGTGGGCTAAATTCCCTGATTTTCAAACTCGCATCCGTGATGCCA TTGTGAAACGCCAGGCACTGGATCGCATCATGATCGGCTTTAACGGTATCAAGCGGGTAAAAACCTCTGATCATACCGTT AATAAGCTATTGCAAGATGTCAACCGGGGCTGGCTGCAAAGCATTCGTGATGATGCGCCGGGCCAGATGATGGATAAGAT TGTTGATGATAAAGGCGATGTTATCTCGCCTAAAATCCGCATCGGCAAAGGCGGCGATTTCAATAATCTGGATGCGCTGG TGATGGCTGCAACCGATGAACTGATCGAGCCCTGGTTCCAGGAAGATACCGAGCTTGTCGCGATTACCGGCCGCCAGTTA CTGGCCGACAAATATTTTCCTATCGTCAACCAATCACAGCCGAACACAGAAGCGCTGGCCGCTGACTTGATTATCAGTCA GAAGCGTATCGGTGGTCTGCCCGCAGTACGTGCGCCGTCTTTCCCGCCTGATGCCATTTTTATCACCCGGCTAGATAACC TGTCTATTTACTGGCAGGACGGCACCCGCAGGCGCTCAATCATCGACAACCCACGCCGTGACCGTATTGAAAACTTTGAA TCGGTTAACGAGGCCTACGTGGTTGAAGATTTTGGCTGTGTGGCCCTGATTGAAAACATTGAGTTCGGTGATTTTTCCGT CCCAGCAGAGGGTTAA Protein sequence : MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYPVDEKEGEKVGLSIDRPIAST TDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMWAKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTV NKLLQDVNRGWLQSIRDDAPGQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQDGTRRRSIIDNPRRDRIENFE SVNEAYVVEDFGCVALIENIEFGDFSVPAEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 2e-107 | 63 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 2e-107 | 63 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 5e-79 | 51 |
