Gene Information

Name : YPTB1855 (YPTB1855)
Accession : YP_070381.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Unknown
Product : orf4 of phage P2 (gene L)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2201186 - 2201677 bp
Length : 492 bp
Strand : -
Note : similar to Salmonella typhi STY3679 capsid completion protein (46.8% evalue=3.E-31); Salmonella typhimurium STM2718 Fels-2 prophage: similar to gpQ in phage 186 (46.2% evalue=2.E-30)

DNA sequence :
ATGGAAATTGTCATTAACACCAATCAGACACCAGAAGCGCCAGCGCCCGTGGAACCAGCGGAAAACACAGTCATTAAAAA
TGACGGTTTCTGGCCTGATATCGACCTGAAACAGTACCGCGAAGAATCACGTCAGGACGGCACCATCACGCAGCCGCGTG
TTATTGAAGCGGCATTGTTTGCCATCAATGAAGTGAATGATCGGCTCGCAATCTGGCGCTTAACCCAGCAAAAACAGGGT
TATCTGTCAGCGGCTGAGGTACCGGTGGAAAAACTGAACGAGGAGAGCACTCGCATTCAGTTGTACCGCACCGCGGTATT
TTGCCTGATGCAAGCCCGTCTAACTGATCGTTTTCGCGGTTTTGATACCACCGGCACGGGCGGCAAGCGGGCCGATTCAC
TGGAACCCACTATTGATAATTTGCGCCGTGATGCTGCGTGGGCAATTAACGATATTCAGGCGATCAACCGCATGACGGTT
GAGCTGATTTAA

Protein sequence :
MEIVINTNQTPEAPAPVEPAENTVIKNDGFWPDIDLKQYREESRQDGTITQPRVIEAALFAINEVNDRLAIWRLTQQKQG
YLSAAEVPVEKLNEESTRIQLYRTAVFCLMQARLTDRFRGFDTTGTGGKRADSLEPTIDNLRRDAAWAINDIQAINRMTV
ELI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4317 NP_807912.1 capsid completion protein Not tested SPI-7 Protein 1e-20 47
STY4623 NP_458705.1 putative capsid completion protein Not tested SPI-7 Protein 1e-20 47
unnamed ABR13468.1 predicted capsid completion protein Not tested PAGI-6 Protein 5e-14 41