Gene Information

Name : YPTB1845 (YPTB1845)
Accession : YP_070371.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Unknown
Product : bacteriophage P2-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 2195486 - 2196394 bp
Length : 909 bp
Strand : -
Note : similar to Salmonella typhi STY4613 probable phage baseplate assembly protein (66.8% evalue=1.E-111); Salmonella typhi STY3689 phage baseplate assembly protein (67.5% evalue=1.E-113)

DNA sequence :
ATGCCGACCATCGACTTAAGTCAGTTACCGGCACCGCGGGTGATTGAATCACTGGATTTTGAAAGCCTGCTTGCATTGCG
TAAAGAAGATTTTATTGCCTTATATCCGTCCGAGCAGCAAGCCGCAGTGAGATTAACGCTGTCATTTGAATCTGAACCCA
TCGTGAAGTTATTGCAAGAAACCGCTTACCGCGAGTTGCTGTTGCGCCAGCGAGTGAATGAAGGGGCACAAGCGGTGATG
GTGGCCTACGCAAATGGCAGTGATTTGGACCACCTCGGCGCAAACAATGGCATTGAGCGACTGACCATCACCTCGGCCAA
TCCAGACGCCATCCCGCCCACTGCCGCCGCGATGGAGTCTGACGACGATTTCCGGGTACGCATCCCGCAAGCCTTTGAGG
GCTTGAGCGTCGCCGGGCCAACCGGTGCGTATGAGTATCATGCCCGCAGTGCCGATGGCCGGATTGCTGACGCCTCCGCG
ATTAGCCCATCCCCCGCTTGCGTTACCGTCACCGTGCTTTCACGTGAGGGAAATGGTACCGCGACACAGTATTTATTGGA
TAAGGTTTTCTCGGCACTAAACGATGAGAACGTGCGCCCGGTAGCTGACCGCTTAACCGTCAATTCTGCCACCATCGTGG
AGTATCAGATTGACGCCACGCTCTATTTTTATCCGGGGCCGGAAGCTGAGCCAATCCGCGCCGCAGCCGAAGCCCGATTA
CAAAGCTATATCAGCACCCAGCGCCGCTTAGGGCGTGATATTCGTCTGTCAGCTATTTATGCCGCGCTGCATGTTGAAGG
TGTGCAGCGGGTAGAGCTGATCGCGCCGCTGATTGATGTGGTATTAGACAAAACGCAAGCCGCTCACTGCATTGGTTATA
CCTTGACGGCGGGCGGCTCCGATGAATAA

Protein sequence :
MPTIDLSQLPAPRVIESLDFESLLALRKEDFIALYPSEQQAAVRLTLSFESEPIVKLLQETAYRELLLRQRVNEGAQAVM
VAYANGSDLDHLGANNGIERLTITSANPDAIPPTAAAMESDDDFRVRIPQAFEGLSVAGPTGAYEYHARSADGRIADASA
ISPSPACVTVTVLSREGNGTATQYLLDKVFSALNDENVRPVADRLTVNSATIVEYQIDATLYFYPGPEAEPIRAAAEARL
QSYISTQRRLGRDIRLSAIYAALHVEGVQRVELIAPLIDVVLDKTQAAHCIGYTLTAGGSDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 6e-89 67
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 6e-89 67
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 5e-54 54