Gene Information

Name : YPTB1840 (YPTB1840)
Accession : YP_070366.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Unknown
Product : P2 tail tube protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3498
EC number : -
Position : 2191122 - 2191637 bp
Length : 516 bp
Strand : -
Note : similar to Salmonella typhi STY2887 probable major tail tube protein (60.2% evalue=5.E-58); Salmonella typhimurium STM2700 Fels-2 prophage: similar to genes in P2-like phages (61.4% evalue=2.E-58)

DNA sequence :
ATGGCATTACCACGCAAGCTTAAGTTCCTCAATGTGTTCAATGACGGGAACAGCTATCAGGGGGTGGTTGAATCCATCAC
CTTGCCAAAATTAAACCGCAAATTTGAAGACTTTCGCGGGGGCGGGATGAATGGCAGCGCCAAGGTCGATTTGGGGCTGG
CTGATGGGGCGCTGGACGTTGACTGGACGCTGGGCGGTATTGAGTCCGAGATCTACAAGCAATGGGGCGTGACCAAAGTC
GATGGTGTGTTACTGCGTTTTGCTGGCTCCTATCAGCGCGACGATACCGGCGAAACCCACGCGGTAGAAATTGTCCTCCG
TGGTCGCCACGAAGAAATCGACGGCGGTGACAGCAAACAAGGCGATAACAGCACCACAAAAATCTCCACAAAATGTACTT
ACTACAAATTGGCATGGGATGGCGAAGTGCTGATCGAGATCGACATTGTGAACATGGTCGAAATGGTCAGCGGCGTCGAT
ATGCTGGAAGCCCACCGCCGCAACATCGGCCTGTAA

Protein sequence :
MALPRKLKFLNVFNDGNSYQGVVESITLPKLNRKFEDFRGGGMNGSAKVDLGLADGALDVDWTLGGIESEIYKQWGVTKV
DGVLLRFAGSYQRDDTGETHAVEIVLRGRHEEIDGGDSKQGDNSTTKISTKCTYYKLAWDGEVLIEIDIVNMVEMVSGVD
MLEAHRRNIGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4606 NP_458689.1 probable major tail tube protein Not tested SPI-7 Protein 1e-40 61
t4300 NP_807897.1 major tail tube protein Not tested SPI-7 Protein 1e-40 61
unnamed ABR13485.1 phage tail tube protein Not tested PAGI-6 Protein 6e-44 58