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Name : rdgC (YPTB1795) Accession : YP_070321.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : recombination associated protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2974 EC number : - Position : 2143218 - 2144354 bp Length : 1137 bp Strand : + Note : Required for efficient pilin antigenic variation DNA sequence : ATGAGCATTAATTTCAAGAATGTATTGATTTACAAATTATCTCGCGATGTTTCTTTCGCTGATTTGGAAGAGCAAATGGC GCAGTTCGCATTCACACCGTGCGGCAGTCAGGATATGGCGAAAACCGGTTGGATATCGCCAATGGGTAACGAAAGCGCAA CGCTTGCGCATGTGGCTAACAAGCAAATCCTTATCACATTGCAGTGTGAAAAAAAGGATTTACCCGCCCCGGTTATCGCT CGTGAGTTGGCGAGTAAAGTTGAGCGTTTGGAGCAAGAGCAACATCGTAAACTGAAAAAAACAGAAAAAGACTCGCTGAA AGATGAAGTTATCCAGACTCTATTGCCTCGGGCCTTTAGCAAATACTCTACAACATCCATCTGGATTAACGCAGGGGCCG GGTTAATTATCATTGATGCTGCCAGCGCGCGGAAAGCTGAAAATGCGTTGGCATTGCTGCGCAAAACCATGGGTTCTCTG CCTGTGGTCCCTTTGACACTGGAGACCCCGATTGAACTGACGTTAACCGAGTGGTTGCGCTCTGGCGCTGCGCCTGCGGG ATTCATCTTACAGGAAGAAGCCGAGCTTAAAGCCGTTTTGGAGCAGGGCGGCATTCTGCGCAGTAAACATCAGGATTTAG TCAGTGACGAGATCCGTGGGCATATCGCCGCCGGTAAGCTGGTGACCAAGTTGGCATTGGAGTGGCAGGGGCGCATTAGC TTTATGCTGTCCGACGATGGCAGCCTGAAGAGAGTGAAATACAGCACCACGCTGCTGGAGCGGAACGACGATATCGACCG CGAGGATTACGCGCAGCGTTTTGATGCCGATTTTATTTTGATGGCGGGTGAACTGGCCGCACTGATTGCCCATCTAGTGG ATGCGCTGGGCGGCGAGGCAACCAGCAGTTCATGGGTAGATTTGGATGGAGTAGAACGGGACGATGATGATCGCTATCCA GAAGCAGTGAACTTCACCAAGGCGAAAGGAAAAGCCTCAATTTCGGGGCTACAGCGTGAACTCCGTATTGGCTATAACCG TGCCGCATGGCTGATTGAAAGAATGCAGGCTGAAGGCATTGTGTCCCAACCCGCACCAGACGGGACCCGCGAAGTGCTTG CTGGGGAGGGCGCGTAA Protein sequence : MSINFKNVLIYKLSRDVSFADLEEQMAQFAFTPCGSQDMAKTGWISPMGNESATLAHVANKQILITLQCEKKDLPAPVIA RELASKVERLEQEQHRKLKKTEKDSLKDEVIQTLLPRAFSKYSTTSIWINAGAGLIIIDAASARKAENALALLRKTMGSL PVVPLTLETPIELTLTEWLRSGAAPAGFILQEEAELKAVLEQGGILRSKHQDLVSDEIRGHIAAGKLVTKLALEWQGRIS FMLSDDGSLKRVKYSTTLLERNDDIDREDYAQRFDADFILMAGELAALIAHLVDALGGEATSSSWVDLDGVERDDDDRYP EAVNFTKAKGKASISGLQRELRIGYNRAAWLIERMQAEGIVSQPAPDGTREVLAGEGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_00998 | YP_001437103.1 | hypothetical protein | Not tested | Not named | Protein | 7e-81 | 59 |
