Gene Information

Name : YPTB1762 (YPTB1762)
Accession : YP_070288.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Unknown
Product : phage terminase subunit GpP
Function : -
COG functional category : S : Function unknown
COG ID : COG5484
EC number : -
Position : 2114304 - 2116076 bp
Length : 1773 bp
Strand : +
Note : similar to Salmonella typhi STY4627 probable terminase subunit (68.6% evalue=0); Salmonella typhimurium STM2722 Fels-2 prophage: similar to gpP, ATP charging, in phage P2 (68.6% evalue=0)

DNA sequence :
ATGAATACGACACCGAGCACCATTATCAGCGACCCACGGCGACAGGCGGCCTTGCTTTACTGGCAAGGCTTTTCTGTGCG
CCAGATTGCGGACACGCTGGCCCTGAAATCGCCGACTGTGCAGAGCTGGAAGAAGCGCGACGGGTGGGATGCCATTGCGC
CCATTTCTCGGGTGGAAACCAGCATGGAAGCGCGGTTAATTCAGCTCATCATGAAAGACGCCAAAGAGGGGCGGGATTTT
AAAGAGATTGACCTGTTAGGCCGCCAGATTGAACGGCTGGCGCGGGTGAACCGTTATAACCAGACCGGCAGTGAGGCCGA
CTTAAACCCGGCAGTGGCGAACCGCAACAAAGGGGAGCGCAAGACGCCGGACAAAAACCTGTTTAGTGAGTCGGCGATTG
AGAAGCTGGAGTCGATATTTCATGAAAATATCTTTGATTATCAGCGTAATTGGTTTGAGGCCGGGTTAACTCACCGTATC
CGCAATATCCTGAAATCACGGCAGATTGGCGCAACGTTCTTCTTTGCCCGTGAAGCGTTACTGGATGCCATCACAACAGG
CCGTAATCAGATTTTTCTGTCCGCCAGCAAAGCACAGGCGCACGTGTTCAAAAGTTACATTATCGACTTCGCCCGGATGG
TTGACGTTGACCTGAAAGGCGACCCGATGGTGTTACCGAACGGGGCGCGCCTGTTCTTTCTCGGTACTAACGTCCGTACG
GCGCAGAGCTACACCGGCAATCTCTATCTTGACGAATATTTCTGGATCCCCAAGTTTCAGGAACTGCGCAAAGTCGCCAG
CGGCATGTCATTACACAAGAAATGGCGTACCACCTATTTCTCCACCCCGTCGAGTCTGGCGCACAGTGCCTATCCGTTCT
GGTCTGGTGAGCTGTTCAATAAAGGCCGCCGCAATAAATCCGACCATATCCAACTGGATCTCAGCCACAGCCATTTAGCC
CGTGGCGCGCTGTGTGATGATGGTCAGTGGCGGCAGATTGTCACGGTTGAGGATGCACTGGCGGGCGGCTGTAACCTGTT
TGACCTCAACCAGCTCTCACTGGAATACGGCCCGTCAGAATATCAAAACCTGTTGATGTGCGAATTTGTTGACGATCAAG
CGTCCGTCTTCCCGTTCGCCGAGTTGCAGGCTTGCATGGTGGACAGTCTGGAAGAGTGGGAGGACTACAACCCGTATTCG
TTGCGGCCATTTGGGCATCGCCCGGTGTGGATTGGTTACGACCCGTCCGAGGCCAACGGCGGCGACAGCGCCGGGTGTGC
GGTGATTGCACCGCCGATGGTGCCGGGCGGCAAGTTCCGCGTACTGGAACGCCACCAGTGGAAAGGGATGGACTTTGAGG
CGCAGGCCAAACATATCGAAGAGCTGACGCAGAAATATTGCGTGGAGTATATCGGTATCGATGCCACTACCGTCGGCCAA
GGCGTTTTCCAGTTGGTGCGCCAGTTCTTCCCGGCAGCAAGGGAAATCAAATACACCCCTGAAATCAAGACCGCCATGGT
GCTGAAAGCCAAGCACACCATCAATAACGGCCGCCTGGAATATGACACCGGCCACACCGACATCACCCAGTCCTTTATGG
CCATTCGCAAAACCATGACCGCCAGCGGCAAAAGCTCGACTTATGTTGCCAGCCGCAGCGAAGAAGCCAGCCACGCCGAT
GTGGCGTGGGCGATTATGCATGCCCTGTTAAATGAACCCCTTACCGCGACATATGGCGGTCACAGCCCTAATTTCTTGGA
GTTTTACCAATGA

Protein sequence :
MNTTPSTIISDPRRQAALLYWQGFSVRQIADTLALKSPTVQSWKKRDGWDAIAPISRVETSMEARLIQLIMKDAKEGRDF
KEIDLLGRQIERLARVNRYNQTGSEADLNPAVANRNKGERKTPDKNLFSESAIEKLESIFHENIFDYQRNWFEAGLTHRI
RNILKSRQIGATFFFAREALLDAITTGRNQIFLSASKAQAHVFKSYIIDFARMVDVDLKGDPMVLPNGARLFFLGTNVRT
AQSYTGNLYLDEYFWIPKFQELRKVASGMSLHKKWRTTYFSTPSSLAHSAYPFWSGELFNKGRRNKSDHIQLDLSHSHLA
RGALCDDGQWRQIVTVEDALAGGCNLFDLNQLSLEYGPSEYQNLLMCEFVDDQASVFPFAELQACMVDSLEEWEDYNPYS
LRPFGHRPVWIGYDPSEANGGDSAGCAVIAPPMVPGGKFRVLERHQWKGMDFEAQAKHIEELTQKYCVEYIGIDATTVGQ
GVFQLVRQFFPAAREIKYTPEIKTAMVLKAKHTINNGRLEYDTGHTDITQSFMAIRKTMTASGKSSTYVASRSEEASHAD
VAWAIMHALLNEPLTATYGGHSPNFLEFYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4627 NP_458709.1 probable terminase subunit Not tested SPI-7 Protein 0.0 69
t4322 NP_807916.1 terminase subunit Not tested SPI-7 Protein 0.0 69
unnamed ABR13464.1 predicted ATPase terminase subunit Not tested PAGI-6 Protein 3e-171 60