|
Name : YPTB1760 (YPTB1760) Accession : YP_070286.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : major capsid protein Function : - COG functional category : - COG ID : - EC number : - Position : 2111986 - 2113224 bp Length : 1239 bp Strand : - Note : Bacteriophage PhiD266; similar to Salmonella typhi STY4625 major capsid protein (58.4% evalue=1.E-113); Salmonella typhimurium STM2720 Fels-2 prophage: similar to gpN, major capsid, in phage P2 (56.9% evalue=1.E-113) DNA sequence : ATGCGCCCAGCAACCCGTTTTAAATTTAATGCCTATCTGACCCGTCAAGCCGAGCTGAACGGGGTAGAAACCGGCGACCT GAATAAAAAATTCAGCGTTGAACCCTCTGTCACACAAACCATCATGACCCGCGTCCAAGAATCCTCAGAATTTCTGAGCC GTATCAATATTGTGCCGGTATCAGAACTGACCGCCGAGAAAGTGGGGTTGAGTGTTACCGGGTCAATTGCCAGCAATACG GATACCGATAGCGGCGACGAGCGCGAAACCGCCGAGTTTGCCGGGCTGGACAGTGAGAAGTATTTCTGTGAGCAGGTGAA TTACGACTTCCACATTCGCTATAACACCCTTGACCTGTGGGCGCGTTATCAGGACTTCCAGACCCGCTTACGCGACGCGA TTATCAAGCGACAGGCACTTGACCGCATCATGGCGGGCTTCAACGGCATCAGCCGCGCCAAGACATCCAACCGTGTACAA AATCCATTGTTGCAGGATATCGCAGTGGGCTGGTTGCAGAAATACCGCAACAACGCACCAACCCGCGTGATGAGTAAAGT TATCGATGAAGATGGCGCGGTAGTGTCAGAAAAAATTCGTGTTGGCCATGGTGGCGATTATGCCAATCTGGACGCGTTGG TCATGGATGCCACAAACCAGATGATTGCTGACTGGCATCAGGAAGACCCGGAACTGGTGGTCATCACTGGCCGTCAGTTG ATGCAGGATAAATATTTCCCTATCGTCAACAAAGAGCAGGAAAACAGCGAAACCCTCGCTGCTGACCTGATTATCAGCCA AAAACGCATCGGTAATTTACCGGCTATCCGTGTGCCGTTCTTCCCGTCTAACGCGTTCTTTATTACCCGCCTCGATAACC TGTCTATTTACTGGCTGGAAGACTCGCACCGCCGTCATATCGATGAGAACGCCAAACGTGACCGCATCGAAAACTACGAA TCCATTAAGCAGGATTATGTGGTGGAAGATTACGCCTGCGGCTGTCTGGTGGAGAACATCGAGATTTTGCCACCACCACA GAAAAAAGATGAACCGGAATCTGGAGCGGATAAAAAAGCTGCGTCTGACGCACCTAACTACGATGGTCTAGCAGCCGCGA TTATTGCTGCAGTAAAAGTGGCTGCTAACCCGGATGAAACTAAGCCGGAAGCCACAGCCAACGCGGAAAACGCACCGGAA ACCACAGGCGAAGCACCAGCCGCGAAGGGGAGTAAATAA Protein sequence : MRPATRFKFNAYLTRQAELNGVETGDLNKKFSVEPSVTQTIMTRVQESSEFLSRINIVPVSELTAEKVGLSVTGSIASNT DTDSGDERETAEFAGLDSEKYFCEQVNYDFHIRYNTLDLWARYQDFQTRLRDAIIKRQALDRIMAGFNGISRAKTSNRVQ NPLLQDIAVGWLQKYRNNAPTRVMSKVIDEDGAVVSEKIRVGHGGDYANLDALVMDATNQMIADWHQEDPELVVITGRQL MQDKYFPIVNKEQENSETLAADLIISQKRIGNLPAIRVPFFPSNAFFITRLDNLSIYWLEDSHRRHIDENAKRDRIENYE SIKQDYVVEDYACGCLVENIEILPPPQKKDEPESGADKKAASDAPNYDGLAAAIIAAVKVAANPDETKPEATANAENAPE TTGEAPAAKGSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 2e-99 | 59 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 2e-99 | 59 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 2e-85 | 52 |
