Gene Information

Name : YPTB1758 (YPTB1758)
Accession : YP_070284.1
Strain : Yersinia pseudotuberculosis IP 32953
Genome accession: NC_006155
Putative virulence/resistance : Unknown
Product : phage head completion protein GpL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2110750 - 2111223 bp
Length : 474 bp
Strand : -
Note : similar to Salmonella typhi STY3679 capsid completion protein (44.6% evalue=4.E-29); Salmonella typhimurium STM2718 Fels-2 prophage: similar to gpQ in phage 186 (44% evalue=1.E-28)

DNA sequence :
ATGACCACTGTTGTTATCCCCGCGCCACGGCCCGACAAAACGGCCGAACCGGTGATTGAAAATACCTTTTTCTGGCCTGC
GGTTGACCCGATAAAACTGCGTGAGCTGCTGCGCCTTGAGGGAACCATTACCGCTGAGCGCCTGCGTTTTACCATCAAGG
GCGCAATCGCCGAGGTTAACGCCGAGCTGTTCGAGTACCGCCGTGACCAGATGGCCGCTGGCTTTAAAACACTGGCTGAG
GTGCAGGCCGAGCAACTGGACGGCGAAAGTATCCTGTTGGCCGAATACCAGCGCGCGGTCTGTGCCATTACTGCTGCGCT
GCTGGCCGAACGTTATCGCGGCTATGACGCCAGCGCCCGTGGTGATAAACGCGCGGAGGCCATTGAAAGCACGGTTGATG
AGTTATGGCGTGATGCGCGGATTAGCATTCGCAACATTGCCGGAAAATCTCACAGCATTATTGGCCTTATCTGA

Protein sequence :
MTTVVIPAPRPDKTAEPVIENTFFWPAVDPIKLRELLRLEGTITAERLRFTIKGAIAEVNAELFEYRRDQMAAGFKTLAE
VQAEQLDGESILLAEYQRAVCAITAALLAERYRGYDASARGDKRAEAIESTVDELWRDARISIRNIAGKSHSIIGLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4317 NP_807912.1 capsid completion protein Not tested SPI-7 Protein 1e-25 44
STY4623 NP_458705.1 putative capsid completion protein Not tested SPI-7 Protein 8e-26 44