|
Name : YPTB1745 (YPTB1745) Accession : YP_070271.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : tail sheath protein (P2 and 186 bacteriophage) Function : - COG functional category : R : General function prediction only COG ID : COG3497 EC number : - Position : 2102627 - 2103796 bp Length : 1170 bp Strand : - Note : similar to Salmonella typhi STY3696 probable major tail sheath protein (69.7% evalue=1.E-158); Salmonella typhi STY2888 bacteriophage major tail sheath protein (69.7% evalue=1.E-158) DNA sequence : ATGAGTGATTATCATCACGGCGCGCGCGTCATCGAAATCAACGACGGTACTCGCGTTATTTCCACTGTTTCCACCGCCAT TATCGGCATGGTCTGTACCAGCGATGATGCCGACGCGGCAACATTTCCCCTTAACACCCCGGTACTGATTACCAACGTAC TGGCCGCCGCCGGTAAAGCCGGTAAAAAAGGTACCCTGACCGCGTCATTGCTGGCGATTGCGGAGCAGGCCCGCCCGGTC ACCATTGTCGTTCGCGTGGCTACAGGTAAAGATGAGGCTGAAACTACCACCAATATTATTGGTGGTGCTGACGAGAACGG CCGCTATACAGGCATGAAAGCGTTGTTAGATGCGCAGTCTGTTACTGGTGTCCGCCCGCGCATTCTCGGCGTACCGGGGC TGGATAATCTGGAGGTCTCAACCGCACTGGCGGGTATCTGTCAGCAATTACGGGCCTTTGGTTATATCAGCGCCTATGGT TGCAAAACCATTTCAGAAGCGATGTTGTACCGTGACAATTTCAGTCAACGCGAGTTGATGCTGATTTGGCCGGACTTCCT GAGCTGGAACACCACGGCCAACAGCACCGACATTGCTTATGCCACTGCCCGTGCCCTTGGCCTGCGCGCCAAGATTGACC AAGAGACGGGATGGCATAAAACCCTGTCTAACGTCGGCGTGAATGGCGTGACCGGTATCTCTGCCAGCGTCTACTGGGAT TTACAGACCGTTGGCACTGACGCCGACCTGCTCAACCAAGCCTGTGTAACCACCCTTGTGCGCAAAGACGGTTTCAAGTT TTGGGGTTCGCGTACCTGCTCCGATGATCCACTGTTCGCTTTTGAGAACTACACCCGCACCGCACAAATTCTGGCTGACA CCATGGCCGAGGCACAATTGTGGGCGATTGACCGCCCGATGCACCCGACACTGGTTAAAGACATGATTGGCAGCATCAAC GCCAAGTTCCGCGAAATGAAATCCGCCGGGCTGATTATTGACGGTACTTGCTGGTATGACGACAGCGCCAACGATAAAGA CACGCTAAAAGCGGGCAAACTGTTTATTGATTACGACTACACCCCAGTGCCACCACTGGAAGATTTAACTCTTCGCCAGC GTATCACCGATAAATATCTGGTGAACTTTGCCGCTGCCGTCAACAGCTAA Protein sequence : MSDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADAATFPLNTPVLITNVLAAAGKAGKKGTLTASLLAIAEQARPV TIVVRVATGKDEAETTTNIIGGADENGRYTGMKALLDAQSVTGVRPRILGVPGLDNLEVSTALAGICQQLRAFGYISAYG CKTISEAMLYRDNFSQRELMLIWPDFLSWNTTANSTDIAYATARALGLRAKIDQETGWHKTLSNVGVNGVTGISASVYWD LQTVGTDADLLNQACVTTLVRKDGFKFWGSRTCSDDPLFAFENYTRTAQILADTMAEAQLWAIDRPMHPTLVKDMIGSIN AKFREMKSAGLIIDGTCWYDDSANDKDTLKAGKLFIDYDYTPVPPLEDLTLRQRITDKYLVNFAAAVNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13484.1 | putative tail sheath protein | Not tested | PAGI-6 | Protein | 4e-122 | 69 |
| STY4607 | NP_458690.1 | probable major tail sheath protein | Not tested | SPI-7 | Protein | 1e-124 | 68 |
| t4301 | NP_807898.1 | major tail sheath protein | Not tested | SPI-7 | Protein | 1e-124 | 68 |
