Name : fliP (YPTB1693) Accession : YP_070220.2 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2048241 - 2048981 bp Length : 741 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGTCGGTTATCAATAAAACCACACTGGGGCTGCTCACCTTATTTTGCTCGCCTTCGGTATTGGCTCAACTGCCTGGGAT CATCAGCCAACCGTTGGCTAATGGTGGACAGAGTTGGTCTTTACCCGTGCAAACGCTGGTGTTCATCACCACGCTGAGTT TTTTGCCCGCGGCGTTACTGATGATGACCAGTTTTACCCGCATCATTATTGTGCTCGGGTTACTGCGTAACGCGATGGGC ACCCCTTCGGCCCCGCCGAATCAGGTGATGCTGGGGCTGGCACTGTTTCTGACCTTTTTTATTATGTCACCGGTGTTTGA CAAAGTGTATCAAGAGGCTTATCTGCCCTTCAGTCAGGATAAAATCAGCATGGACGTGGCGTTGGATAAAGGCTCACAAC CGTTGCGGGAGTTTATGCTGCGCCAAACGCGGGAATCTGATCTGGCGCTGTATGCCCGGTTGGCAAACCTGCCGCCGCTG GAAGGCCCCGAAATGGTTCCGATGCGTATTCTGCTGCCCGCCTATGTCACCAGTGAGTTGAAAACGGCATTCCAAATTGG TTTTACCGTATTTATTCCGTTCCTGATTATCGATTTGGTGGTCGCCAGTGTGCTGATGGCGCTGGGGATGATGATGGTTC CGCCTGCCAGTATCTCGCTACCGTTCAAGCTGATGCTATTTGTTCTGGTTGATGGCTGGCAATTGTTACTGGGTTCACTG GCACAGAGTTTTTATAGCTGA Protein sequence : MSVINKTTLGLLTLFCSPSVLAQLPGIISQPLANGGQSWSLPVQTLVFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMG TPSAPPNQVMLGLALFLTFFIMSPVFDKVYQEAYLPFSQDKISMDVALDKGSQPLREFMLRQTRESDLALYARLANLPPL EGPEMVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISLPFKLMLFVLVDGWQLLLGSL AQSFYS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 2e-27 | 45 |
hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 2e-27 | 45 |
hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 2e-27 | 45 |
hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 6e-28 | 44 |
hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-32 | 41 |
hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-31 | 41 |
hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-20 | 41 |
hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 2e-20 | 41 |
XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-33 | 41 |
hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-33 | 41 |
hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 2e-21 | 41 |
hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 2e-21 | 41 |
escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-27 | 41 |
escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-27 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
fliP | YP_070220.2 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 2e-100 | 97 |
fliP | YP_070220.2 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 5e-73 | 68 |
fliP | YP_070220.2 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 7e-61 | 57 |
fliP | YP_070220.2 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 2e-60 | 56 |
fliP | YP_070220.2 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 1e-30 | 43 |