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Name : hpaF (YPTB1641) Accession : YP_070168.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3232 EC number : 5.3.3.10 Position : 1992749 - 1993147 bp Length : 399 bp Strand : + Note : similar to Yersinia pestis YPO1765 hpaF; 5-carboxymethyl-2-hydroxymuconate delta-isomerase (100% evalue=2.E-72); Salmonella typhi STY1138 hpcD; 5-carboxymethyl-2-hydroxymuconate delta-isomerase (72.2% evalue=1.E-48) DNA sequence : ATGGCGCATTTCTACGCAGAATGTACGGACAACATCCGTGAACAGGCCGAATTACCCGTCTTGTTTTCTAACGTAAATCA AACTCTGGTCAACACGGGTCTTTTCCCATTGGCAGGTATTCGCAGCCGTGCCATTTGGCTGGATACCTGGCAAATGGCGG ATGGACAGCAAGACTACGCTTTTGTCCATATGACGCTAAAAATAGGCTACGGACGCAGTATCGAGCACCGACAGGCGGTC GGAAAGACATTGTTTGCCTTGATTCAAGCGCATTTCGCAGCCCTGATGTCCCAACGTTATCTGGCTTTGTCGTTCGTCAT AGAGGAGCTGGATCCAACGCTTAGCTTTAAACAGAACAATGCTCATACATTGTTCCAACAGGGAACCTCTGCATGTTAG Protein sequence : MAHFYAECTDNIREQAELPVLFSNVNQTLVNTGLFPLAGIRSRAIWLDTWQMADGQQDYAFVHMTLKIGYGRSIEHRQAV GKTLFALIQAHFAALMSQRYLALSFVIEELDPTLSFKQNNAHTLFQQGTSAC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaF | AAO17181.1 | HpaF | Not tested | tcd island | Protein | 7e-47 | 75 |
