|
Name : YPTB0160 (YPTB0160) Accession : YP_068707.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : fimbrial protein Function : - COG functional category : N : Cell motility COG ID : COG3539 EC number : - Position : 190727 - 191257 bp Length : 531 bp Strand : - Note : similar to Yersinia pestis YPO3877 fimbrial protein (100% evalue=8.E-93); Salmonella typhimurium STM0340 stbA; fimbriae; major subunit (49.1% evalue=2.E-37) DNA sequence : ATGAAAAAAATTACTTTAGCTATCGCGTTATTCTCGGCATCTACAACGGTTGCCATGTCTGCCAGTAATAATACGATTAC GTTCCAAGGGGAAGTCACAGCACAAACCTGTTCTGTTACCGTAAACGGCCTTGAAGCAAATCCAGTTGTCTTGTTGCCTA CAGTATCAAGTAGCGATTTAGACGCTTCCGGCCAAACTAAAGGCAAAACAACCTTTACGCTAGGTGTGTCTGGCTGTACA TCAGGATCAGATGATCTTGATATCAAAACTGTTTTCATCGGTAGCCTGGTTACTGCTACTGGTAATTTACAAAATACAGG TACCGCAGGGAACGTTGAACTTCAATTATTGAAGGATGCCACGACAACAACGGGTATCGACCTAAATAGTGGTTTGGCAC AAGACGGTATCGTATTGCTAGCAGGTGATACATCTGCGGAGCATGATTTTGCTGTTCAGTATTATGCCACTGGGCAATCA ACACCAGGGTCTGTCATTGCATCTGTACAGTATGCTGTTTCTTACTTGTAA Protein sequence : MKKITLAIALFSASTTVAMSASNNTITFQGEVTAQTCSVTVNGLEANPVVLLPTVSSSDLDASGQTKGKTTFTLGVSGCT SGSDDLDIKTVFIGSLVTATGNLQNTGTAGNVELQLLKDATTTTGIDLNSGLAQDGIVLLAGDTSAEHDFAVQYYATGQS TPGSVIASVQYAVSYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cupD1 | AAP84171.1 | putative fimbrial protein precursor | Not tested | PAPI-1 | Protein | 4e-22 | 42 |
