|
Name : ybtX (YPTB1600) Accession : YP_070128.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : MFS superfamily transporter signal transducer Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 1945537 - 1946817 bp Length : 1281 bp Strand : + Note : - DNA sequence : ATGAGTGATGTTCAGTCGAATGTGAAACCGCTGACGTTGACGACCGGGCGGGTGATTTTTGCTATTGCCGGCGTCTATGT GACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCCTTACCCGCGCTGGTGCGCGCTGCTGGCGGTTCGCTGGCGCTTG CCGGTGCGACAACCCTGTTTATGCTGCCCTGGGCGCTGAAGTTTATTTGGGCGCCGTGGATCGAGCGCTGGCGGCTTCCG CCCGGTAGCCAGGAACGCCGTTCCCGCATGTTAATCCTGCGTGGTCAGGTCGCGCTAGCGGCGATCCTGACTATTGCCGC AGCGATTGGCTGGTTTGGGCGAGAAGGGGGATTCCCCGATACGCAAATCGTCGCGTTATTTGTTCTGTTTATGGTGGCAG GCACGGTCGCCTCCACCATTGATATCGCCAGCGACGGCTTTTGCGTCGATCAACTGACCCGCACGGGTTACGGCTGGGGA AACAGCGTGCAGGTCGGCGGCAGCTATCTGGGAATGATGTGCGGCGGCGGGGTGTTCCTGATGCTGTCGGCGGCATCCGG CTGGCCTGTCGCCATGCTGATGATGGCGGTGCTGATTATGGCGCTGTCACTCCCGCTGTGGCGCATTACGGAGCCGACGC GAACAGCGACTATCCCGCATGTTCCGGCGTTAGGTTATGCGCTAAGGAGGAAGCAGGCGCGCCTGGGCTTACTGCTGGTA TTGATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTCTTCTGGCACCGCTGTTGTTGGATCATGGGTTGAGCATGTCCGC ATTGGGCGCGCTGTTCAGCGGCGGCAATATTGCAGCGGGCATAGCAGGAACGCTGGCCGGCGGATTGCTGATGAAATACA CCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGTCCAGGGGATCGCGCTGCTGGCGGTGGTGATGACGCTCATGATG GCGCCGGGTCATCTGCTGCTGCCGATTCTCCAGTGTCTGGTCATTGTCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTG TCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTGCAGGCCGGTGTCGACTTCACCCTCTTTCAATGTACTGACGCGG CAATCGCCATTCTGGCAGGCGTTATCGGTGGCGTTGTTGCTCAACATTTTGGCTATGCGGCCTGCTTCCTGTTTGCCGGG GCATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCCGGCTGCATTCGGCAAGAGAACTGATGACAAGCGCAATTGATTG A Protein sequence : MSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLP PGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFPDTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWG NSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLIMALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLV LMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAGIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMM APGHLLLPILQCLVIVQSISLACALVCLYATLMSLSSPLQAGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAG AFTLLAAWVAYIRLHSARELMTSAID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp8 | YP_002346906.1 | signal transducer | Not tested | HPI | Protein | 2e-129 | 100 |
| ybtX | YP_070128.1 | MFS superfamily transporter signal transducer | Virulence | HPI | Protein | 2e-129 | 100 |
| ybtX | CAA21386.1 | - | Virulence | HPI | Protein | 8e-129 | 100 |
| ybtX | NP_669702.1 | hypothetical protein | Virulence | HPI | Protein | 8e-129 | 100 |
| ybtX | NP_993011.1 | signal transducer | Virulence | HPI | Protein | 8e-129 | 100 |
| irp8 | YP_001006811.1 | putative signal transducer | Not tested | HPI | Protein | 2e-127 | 99 |
| irp8 | CAB46571.1 | signal transducer, Irp8 | Virulence | HPI | Protein | 2e-126 | 99 |
| ybtX | YP_853071.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 3e-128 | 99 |
