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Name : clpB3 (YPTB1489) Accession : YP_070017.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Virulence Product : Clp ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1782551 - 1785199 bp Length : 2649 bp Strand : + Note : similar to Yersinia pestis YPO1471 ATPase subunit of ATP-dependent protease (95.6% evalue=0) DNA sequence : ATGACAACGCATTCAGCACACTTATTACGTCGGTTAAATCCCTATTGCGCACAGGCACTGGCCGGTGCCGCCACCCTGTG TCAGACCCGCGCCCATGCTGAGATCACTGTCGAACACTGGTTGTTAAAATTGCTGGAGCAGGGCGAAGGCGATATTACAG TCATTGCCCGGCGTTATGAGTGGGACATGGACAGCCTGTGGCAGGGATTACTGGCCCATCTGGACACCTTGCCGCGCACG GTACAGGGCAAACCTCAGTTGTCCGCCGCGTTACAGCAACTGATCAAAAACGCCTGGCTAGATGCCTCGTTGCAGGAAGA TGCCGATGCGGTGCGTTCCGTTCATCTGTTATCTGCTCTGATAAATTCGCCATCATTACTGGCCGCCGATGCCGCCTGGC CGTTGCTCAGCCTGAGTACCACCCAGTTACACCGCCTGTTACCGCTACTGGACAGCCAATCAGACGAACGCCCTGAAGTT CAGCAGGCAGCGGCACTGGCAGACAGCCCGGTCAATCTGACCAATGAGGCAGCGACTACTACCTCTGCCAGCGGCCAGCC GCAACTCAATGACGCCCTGCAAGCGGCGCTGGATAAATTTACGTTGGACGTCACCGCCAAAGCGAAAACCGGGCAGATTG ACCCGATTTTTGGTCGCGACAGCGAGATCCGCCAGATGGTCGATATCCTGTCGCGCCGCCGTAAAAATAACCCGATTCTG GTCGGTGAACCGGGTGTGGGTAAAACCGCCTTGGTTGAAGGGCTGGCACTGCGTATTGCCGAGGGCAACGTACCGGACAG CTTAAAAACCGTCAGTGTGCGCACTCTGGACTTGGGCCTGTTGCAAGCCGGGGCTGGGGTCAAAGGTGAGTTCGAACAGC GGCTGAAAAATGTTATCGAGGCGGTACAACAATCACCGACGCCGGTGCTGCTGTTTATCGACGAAGCCCACACCATCATC GGTGCCGGTAATCAGGCCGGTGGCGCAGATGCGGCCAACCTGCTGAAACCGGCACTGGCGCGTGGCGAGTTGCGCACCAT CGCCGCCACCACCTGGTCCGAATACAAACAGTATTTTGAACGCGATGCCGCACTGGAGCGCCGCTTCCAGATGGTCAAAG TGGACGAGCCGGATGATGACACCGCCTGCCTGATGCTGCGTGGCCTGAAAGAACGTTACGCCACCCATCACGGCGTGCAT ATTCTGGACGCCGCTATCACCGCAGCGGTTACCCTGTCGCGCCGCTTTCTGACCGGTCGCCAACTGCCGGACAAAGCGGT GGATCTTCTCGACACCGCAGGTGCGCGCGTGCGCATGAGCATCGACACCTTGCCGACTGCGTTGATGGAGATTAACGCCG AACTGGCCGCACTGGCGATGGAGCAACAGGCCATCGAACAGGACTTGCTCCTGCTGCCGAATGTCAGTTCAACGCGCTTA CCTGAGATTGAGCAACGCCGCGCCGCGCTGGCGGTTGGGCAGCAAACACTCGAACAGCAATATAAAGAAGAGAAGCGGTT GACCACCCTGATTATTGAGGCGCGTCAGGACATCGCCAACGCAGCACATCTGGTCGCGTTGCAGGAGGAACTCGTTCAGA TTCAGGGCAATGCGCCGCTGTTGTCGCTGGACGTTGATGTGCGCACTGTTGCGGCTGTGATCGCCGACTGGACCGGTGTG CCGCTGGGCAGTTTACTCAAAGACGAACAAACCAACTTGCTGTCACTGGAAAATCGTCTGGGCGAGCGAGTAATTGGGCA GGATGCGGCATTAGGCGCGCTGGCGCAACGGCTGCGGGCGGCGAAAACCGGCCTGACATCAGAGAATGGTCCGCTGGGGG TGTTCCTGCTGGTCGGGCCGAGTGGGATCGGCAAAACCGAAACCGCGCTGGCACTGGCCGACAGCCTGTTCGGCGGGGAA AAATCGCTGATTACCATCAACTTATCGGAGTATCAGGAAGCACACACCGTCTCCCAATTGAAAGGGTCGCCCCCGGGCTA TGTCGGTTACGGACAGGGCGGCGTATTGACCGAAGCGGTGCGCAAACGGCCTTACAGCGTGGTGCTGCTGGATGAAGTCG AGAAGGCCCATCGTGATGTGCTGAACCTGTTCTATCAGGTGTTTGACCGCGGTTTTATGCGCGACGGTGAAGGGCGCGAA ATTGATTTCCGCAACACGGTGATAGTGATGACCGCCAATCTGGGCAGTGATCATCTGATGCAGTTGCTGGATGAGCAACC GGACGCGCCGGACAGCACCCTGCATGAACTGCTGCGGCCAATATTGCGCGACCACTTCCAGCCCGCGCTGCTGGCCCGCT TCCAGACGCTGATCTACCGCCCACTGAATGCCCCCGCGCTGCGCACCATCGTCGAAATGAAACTGGCACAGGTCGCTAAC CGCCTCAAAAAACATTACGGCCTGCACTGCACTCTTGAAGCAAGCCTGTACGACACACTGGTCGCCGCCTGCCTGCTGCC GGACACCGGCGCACGCAACATCGACAGCCTGCTCAATCAGCAGATTTTACCGGTATTGAGCCAGCAGCTGTTAAGCCGCA TGAGCGAGCAACAGCGCACCACCTCGCTGACGCTGGGCTGGGATGAAGCCGACGGCATTACCCTTGAATTTGAAGGAGGC GAAAAATGA Protein sequence : MTTHSAHLLRRLNPYCAQALAGAATLCQTRAHAEITVEHWLLKLLEQGEGDITVIARRYEWDMDSLWQGLLAHLDTLPRT VQGKPQLSAALQQLIKNAWLDASLQEDADAVRSVHLLSALINSPSLLAADAAWPLLSLSTTQLHRLLPLLDSQSDERPEV QQAAALADSPVNLTNEAATTTSASGQPQLNDALQAALDKFTLDVTAKAKTGQIDPIFGRDSEIRQMVDILSRRRKNNPIL VGEPGVGKTALVEGLALRIAEGNVPDSLKTVSVRTLDLGLLQAGAGVKGEFEQRLKNVIEAVQQSPTPVLLFIDEAHTII GAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKERYATHHGVH ILDAAITAAVTLSRRFLTGRQLPDKAVDLLDTAGARVRMSIDTLPTALMEINAELAALAMEQQAIEQDLLLLPNVSSTRL PEIEQRRAALAVGQQTLEQQYKEEKRLTTLIIEARQDIANAAHLVALQEELVQIQGNAPLLSLDVDVRTVAAVIADWTGV PLGSLLKDEQTNLLSLENRLGERVIGQDAALGALAQRLRAAKTGLTSENGPLGVFLLVGPSGIGKTETALALADSLFGGE KSLITINLSEYQEAHTVSQLKGSPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGRE IDFRNTVIVMTANLGSDHLMQLLDEQPDAPDSTLHELLRPILRDHFQPALLARFQTLIYRPLNAPALRTIVEMKLAQVAN RLKKHYGLHCTLEASLYDTLVAACLLPDTGARNIDSLLNQQILPVLSQQLLSRMSEQQRTTSLTLGWDEADGITLEFEGG EK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-136 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB3 | YP_070017.1 | Clp ATPase | VFG2084 | Protein | 1e-134 | 43 |
| clpB3 | YP_070017.1 | Clp ATPase | VFG2076 | Protein | 6e-149 | 43 |
