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Name : serS (YPTB1404) Accession : YP_069935.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1676219 - 1677511 bp Length : 1293 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATCCCAATATGCTGCGCAATGAGCTAGACGCAGTCGCCGAAAAACTGGCTCGCAGAGGTTTTAAACTTGATGT TGAGGTGTTGCGCCAACAAGAAGAGCGCCGCAAAGTTTTACAGGTTGAAACAGAAAGTCTGCAGGCAGAACGTAACTCCC GATCGAAACAGATCGGTGCAGCAAAGGCGCGTGGCGAAGATATCGAACCATTACGTCTGGAAGTGAATGCTCTGGGTGAA AAACTGGATGCCGCTAAAGCTGAGTTGGATAAGTTACAAAACGAAATCCGCGATTTAGCGCTGTCTATCCCTAATCTGCC AGATGATTCAGTACCGGTAGGTAAAAACGAGAATGACAATATTGAAGTCAGTCGGTGGGGCGAGCCTCGCAAATATGACT TCGACGTAAAAGATCATGTTTCTCTGGGCGAAATGGCCGGTGGCCTTGATTTTGCTGCCGCTGTGAAACTGACCGGCGCA CGCTTTGTGGTGATGAAAGGGCAAATTGCCCGTATGCACCGTGCTCTGTCTCAGTTCATGTTAGACCTGCACACCGAGAA ACACGGTTATCTGGAAGCTTACGTCCCTTATCTGGTTAATCATGCCACCTTGTACGGTACGGGTCAGTTACCCAAGTTTG GTGAAGATCTATTCCATACTAAACCGTTGGCAGAAGAATCAGATAACAGTAACTATGCTTTGATTCCTACTGCTGAAGTT CCGCTGACCAACTTGGTGCGCGATGAAATTTTGGAAGAGGATTCTCTGCCATTGAAGTTGACCGCCCATACACCATGCTT CCGTTCTGAAGCAGGTTCCTATGGCCGTGATACCCGTGGTTTGATCCGGATGCATCAATTCGACAAAGTTGAAATGGTGC AGATCACTCGTCCGGAAGATTCTATGGCCGCGCTGGAAGAGTTGACAGGGCACGCCGAGAAAGTTCTGCAATTACTGGAG TTGCCATACCGCAAGGTATTGCTGTGTACGGGTGATATGGGCTTTGGCTCCAGCAAAACTTACGATCTGGAAGTATGGTT GCCAGCACAGGACACTTACCGCGAAATATCCTCATGTTCTAACATGTGGGATTTCCAGGCGCGCCGTATGCAGGCCCGTT ATCGCAACAAGACCGACAGAAAGACGCGTTTAGTGCACACGCTGAACGGCTCTGGTTTGGCGGTTGGGCGTACCTTGGTA GCGGTGTTGGAAAACTATCAACAGGCAGATGGTCGTATCCAGGTCCCTGACGTATTACGTCCATATATGGGTGGCTTGGA ATATATTGGTTAA Protein sequence : MLDPNMLRNELDAVAEKLARRGFKLDVEVLRQQEERRKVLQVETESLQAERNSRSKQIGAAKARGEDIEPLRLEVNALGE KLDAAKAELDKLQNEIRDLALSIPNLPDDSVPVGKNENDNIEVSRWGEPRKYDFDVKDHVSLGEMAGGLDFAAAVKLTGA RFVVMKGQIARMHRALSQFMLDLHTEKHGYLEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLAEESDNSNYALIPTAEV PLTNLVRDEILEEDSLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRPEDSMAALEELTGHAEKVLQLLE LPYRKVLLCTGDMGFGSSKTYDLEVWLPAQDTYREISSCSNMWDFQARRMQARYRNKTDRKTRLVHTLNGSGLAVGRTLV AVLENYQQADGRIQVPDVLRPYMGGLEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-108 | 55 |
