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Name : triC (pYptb0006) Accession : YP_068514.1 Strain : Genome accession: NC_006154 Putative virulence/resistance : Resistance Product : TriC protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 3506 - 6253 bp Length : 2748 bp Strand : + Note : similar to CAD58564 TriC protein. Yersinia enterocolitica. Score = 1244 bits (3218), Expect = 0.0 Identities = 594/915 (64%) DNA sequence : ATGACCACAATATTCAAGGCGTTGACACGTCCGGCCATGATTCTAGGTGTGCCTATAATCCCGCTTATTATTGCTATGAG TGGGATTTCACTGGCGGCGGTGTACACCACAACAAAGTTTTTCTTCCTTATTCCCGTTGCGTGGTGGTATATGCGCCATC TGGCCCGAAAAGATGCACATATTTTTAGTCTGATGGGTCTCAAAATACGCACCAAAGGGAACGGGAAAACTAATCAACAT TTTGATTCAACCGCGTGGCTGGCTAACGACTACGGTGACGTTGATATAACGGAGTTTCTAAACGCTATGCGGCTCAATGA AAGAGTGACGTTAACCGATAAAATCCCGTATTCATCACATGTGCATGAATACATTATCAAGGGTAAAAACAGTGACCTGA TGGCCTCATGGGAGGTAGGGGGGAGTGTGTTTGAGTTCGAAACCGACGAACAGAAAAACATGAAATCAGCCCAATTGAAT ACGCTGATTAAATCGTTTGAGGGGGAGCCGGTCACGTTCTACATTCATAATAGCCGTGAAAACTATCATGACAGCTTTCA ACAAAACTCGGGTAATGCGTTTGCTGATGAAGTGGCGAAGCGCTATTACGAGGGGATGGAGGGTGACGCATTTTACCGGA ATCGGCTGTTTTTAACGGTTTGTATGATGCCCCCCTCTACGCTGGGTAAAGCCGAAAGAAAAGGCATGAGTGCCGGACAA AAACAGCGTTCTTTAGACGGGGCCATCAAGCGTATGCAGGAGATACGCGCCACACTCAATACGGCACTGACGCCGCTTCA TGCTACCCCGCTCGGCACCTTTGAAGAAGATGGGGTGGTGTACTCATCCCAACTCAGCTTCTATCACTTCTTGCTGACGG GCATCTGGCAAAAAATCCGGGTCACACGCACCCCATTCTATGAGGTATTGGGAACCGCAGACCTCTTCTTTTCGGGGGCG TCGGGACAACGTAATACTATCCGTGGCACCGAATTCTTTCGAACCTTGGAGATTAAGGATTATTCGCCGAAGAGCGTAAC AGGGTTGCTCGATGTGCTGTTACATGCGCCGTGCAACTATGTGTTAACGCAGTCTTACACATGTATGGCGAAAGATGAGG GGCAGGAGGCCATCAAGACCGTCGAAAAACGCTTATCAAGCGCCGAAGATGATGCTGTTTCACAACAGACTGACTTACTG GTTGCACGTGACTTGCTCCAGTCGGGCCATATTGCATTCGGGCTGTATCATTTTTCGCTTTTGATTTCGGCCCCCACATT AGAAGCGTTGGTGAAGGATACCAACACCCTAGCGAACGGGTTAACAAATGCAGGGATTGTGTCCACGCTGGCGTCACTGT CATTAGCAGCGGGGTATTTTGCACAAATGCCAGGTGTTTACACGCTGCGTCCGAGACTGGTGCCTGTCAGTAGTCAGAAT TTTGTCGAGATGGCGTCATTCCATAATTTCAGCGAGGGCAAACGGGATAGGGTGCCGTGGGGCGAAGCGGTGGCTGTGGT AAAAACGCCGAGCGGGGGCGCGCATTATCTCAATATCCATAACACCCTGCTGGGTAAAGACGATTTCAACGAAAAAAACG CCGGTAATGCGTCGATTGTGGGGACTATCGGCTCCGGTAAGACCATGTTGATAAGCTGGCTGGCAAATATGATGCAAAAG TATCGGCAGCAGAGTTCGTTTTCCCCTCATGCTAAAAAAAAGCGCTTATGCACGGTTGTCCTCGATAAGGACAGGGGGAC AGAACTTAATATTCGACAGCTCGGGGGGCGTTATTTTCGGGTTAAAAGTGGGGAACCTACCGGATGGAATCCGTTTCGGC TGAAACCCACTAAACGCAATATAGATTTCATCAAGAAATTAATGAAATTGTTATGTACCCGTAACGGCAATACATTGAGC ACCCGACAGGAAACCCGCCTCAGTGACGCCGTTGATGCTGTTATGTTGGGGCTTGACCACGCCAGCCGTGACCACGGTAT TACGCGGGTGCTGGAGAACATCACAGAACCGGCGACAATGGAGGCGCAAGAGAACGGCCTTAAAATCCGTTTGGCACAGT GGGCGAAGGGGGGGGAATTTGGCTGGGTATTCGATAATGAAGAGGATACGTTTGATATCAGTGAGTGTGATATTTTTGGT ATCGACGGCACCGAGTTTTTAGACGATTCGGATGTGTGCGCCCCTATCTCATTCTACCTGTTGTATCGCATTACCAGTTT ACTGGATGGACGGCGTTTAGTGCTGTTTATTGATGAGGTCTGGAAATGGTTAAATGACCCTGCGTTTAAGAAGCTGATGT TCAATCTTCTTAAAACCATTCGAAAACTCAACGGGCTGGTCATTCCTGCGACTCAGTCACCGTCTGACCTTCTCAAAAGC TCGATTAGCACCGCGATGGTTGAGCAATGTGGTACGCAATTCTTTTTGCCTAACCCAATGGCAGAATATAAAGACTATGT GGAAGGGTTGAAAGTCCCGCCAGCCGTGTTTGAGGTGATTAAAGGGCTTGATCCTCTATCACGGCAATTTGTCCTCATTA AAAGCCCGTTACGAAAAGGGGATACCGAACGGTTTGCTGTTCTGGTCACGCTCGATTTATCAGGGCTTGGCAAATACACC AAAATTCTGAGTGGCAGCGAAGATAATCTGGCTATTTTCGATAGCATCTTTACTGAAGGTATGGCACCGGAAGAGTGGCG AGATACTTTTCTCGCTCAAGCCATTTAA Protein sequence : MTTIFKALTRPAMILGVPIIPLIIAMSGISLAAVYTTTKFFFLIPVAWWYMRHLARKDAHIFSLMGLKIRTKGNGKTNQH FDSTAWLANDYGDVDITEFLNAMRLNERVTLTDKIPYSSHVHEYIIKGKNSDLMASWEVGGSVFEFETDEQKNMKSAQLN TLIKSFEGEPVTFYIHNSRENYHDSFQQNSGNAFADEVAKRYYEGMEGDAFYRNRLFLTVCMMPPSTLGKAERKGMSAGQ KQRSLDGAIKRMQEIRATLNTALTPLHATPLGTFEEDGVVYSSQLSFYHFLLTGIWQKIRVTRTPFYEVLGTADLFFSGA SGQRNTIRGTEFFRTLEIKDYSPKSVTGLLDVLLHAPCNYVLTQSYTCMAKDEGQEAIKTVEKRLSSAEDDAVSQQTDLL VARDLLQSGHIAFGLYHFSLLISAPTLEALVKDTNTLANGLTNAGIVSTLASLSLAAGYFAQMPGVYTLRPRLVPVSSQN FVEMASFHNFSEGKRDRVPWGEAVAVVKTPSGGAHYLNIHNTLLGKDDFNEKNAGNASIVGTIGSGKTMLISWLANMMQK YRQQSSFSPHAKKKRLCTVVLDKDRGTELNIRQLGGRYFRVKSGEPTGWNPFRLKPTKRNIDFIKKLMKLLCTRNGNTLS TRQETRLSDAVDAVMLGLDHASRDHGITRVLENITEPATMEAQENGLKIRLAQWAKGGEFGWVFDNEEDTFDISECDIFG IDGTEFLDDSDVCAPISFYLLYRITSLLDGRRLVLFIDEVWKWLNDPAFKKLMFNLLKTIRKLNGLVIPATQSPSDLLKS SISTAMVEQCGTQFFLPNPMAEYKDYVEGLKVPPAVFEVIKGLDPLSRQFVLIKSPLRKGDTERFAVLVTLDLSGLGKYT KILSGSEDNLAIFDSIFTEGMAPEEWRDTFLAQAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70302.1 | Pilx3-4/VirB3-4-like protein | Not tested | HPI | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| triC | YP_068514.1 | TriC protein | BAC0398 | Protein | 0.0 | 100 |
