Gene Information

Name : pYV0083 (pYV0083)
Accession : YP_068492.1
Strain :
Genome accession: NC_006153
Putative virulence/resistance : Virulence
Product : yscG; type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 58548 - 58895 bp
Length : 348 bp
Strand : +
Note : similar to Y. pestis YPCD1.56

DNA sequence : 
ATGAAATATAAACTCAACGTACTGTTAGCAGAGATTGCTCTGATTGGAACCGGCAACCACTGCCACGAAGAAGCGAATTG
CATTGCTGAATGGTTACATTTGAAAGGTGAAGAAGAGGCGGTTCAATTGATTCGCCTTTCCTCTTTGATGAACCGTGGGG
ACTACGCAAGCGCCTTGCAACAAGGAAATAAATTAGCTTATCCTGATTTGGAACCTTGGTTAGCCTTATGTGAATATCGC
CTCGGGTTGGGGAGCGCCTTAGAGTCACGTTTAAATCGTCTCGCAAGGAGTCAGGATCCTAGAATACAGACATTTGTGAA
TGGAATGAGGGAGCAACTAAAAACATGA

Protein sequence : 
MKYKLNVLLAEIALIGTGNHCHEEANCIAEWLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLAYPDLEPWLALCEYR
LGLGSALESRLNRLARSQDPRIQTFVNGMREQLKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscG AAO18030.1 LscG Virulence TTSS locus Protein 3e-28 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pYV0083 YP_068492.1 yscG; type III secretion protein VFG0406 Protein 4e-48 99
pYV0083 YP_068492.1 yscG; type III secretion protein VFG0215 Protein 5e-25 54