Gene Information

Name : pYV0068 (pYV0068)
Accession : YP_068477.1
Strain :
Genome accession: NC_006153
Putative virulence/resistance : Virulence
Product : yscO; type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 46759 - 47223 bp
Length : 465 bp
Strand : +
Note : identical to Y. pestis YPCD1.41

DNA sequence : 
ATGATACGCCGCCTGCACCGGGTTAAAGTTTTACGCGTTGAACGTGCGGAGAAAGCCATCAAGACTCAGCAAGCTTGCTT
GCAGGCAGCTCATCGACGTCATCAAGAGGCGGTGCAAACCAGTCAGGATTACCATTTGTGGCGTATTGATGAGGAGCAAC
GTCTATTTGATCAGCGAAAAAACACCACACTGAATTGTAAAGATTTGGAGAAATGGCAGCGACAAATAGCGTCGCTACGT
GAAAAGGAGGCCAATTATGAACTGGAGTGCGCCAAATTATTGGAACGTTTAGCCAATGAGCGTGAGCGCCTTACGTTATG
CCAAAAGATGCTGCAACAGGCTCGTCATAAGGAAAATAAGTTTCTCGAGCTAGTGCGACGAGAAGATGAAGATGAGTTAA
ATCAACAACATTATCAGGAAGAACAAGAACAAGAAGAGTTTCTACAGCATCACAGGAACGCCTAA

Protein sequence : 
MIRRLHRVKVLRVERAEKAIKTQQACLQAAHRRHQEAVQTSQDYHLWRIDEEQRLFDQRKNTTLNCKDLEKWQRQIASLR
EKEANYELECAKLLERLANERERLTLCQKMLQQARHKENKFLELVRREDEDELNQQHYQEEQEQEEFLQHHRNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscO AAO18043.1 LscO Virulence TTSS locus Protein 2e-20 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pYV0068 YP_068477.1 yscO; type III secretion protein VFG0391 Protein 3e-43 100