Gene Information

Name : pYV0063 (pYV0063)
Accession : YP_068472.1
Strain :
Genome accession: NC_006153
Putative virulence/resistance : Virulence
Product : sycN; type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 43747 - 44118 bp
Length : 372 bp
Strand : -
Note : similar to Y. pestis YPCD1.37c

DNA sequence : 
GTGAGTTGGATTGAACCCATCATTTCCCATTTCTGCCAGGATCTGGGAGTGCCAACATCTAGCCCCCTTTCGCCTCTTAT
TCAATTAGAGATGGCTCAATCTGGCACGCTGCAACTGGAACAACATGGTGCGACACTGACATTGTGGTTAGCGCGTTCTC
TTGCCTGGCACCGGTGTGAAGATGCTATGGTCAAAGCGCTAACGCTCACGGCGGCCCAAAAGAGTGGCGCTTTACCGCTG
CGAGCGGGGTGGTTAGGGGAAAGTCAGCTGGTGTTATTTGTCTCGCTTGATGAGCGTTCCTTAACCTTGCCCCTTTTACA
TCAAGCTTTCGAACAGTTACTGCGATTGCAGCAAGAGGTGCTTGCGCCGTGA

Protein sequence : 
MSWIEPIISHFCQDLGVPTSSPLSPLIQLEMAQSGTLQLEQHGATLTLWLARSLAWHRCEDAMVKALTLTAAQKSGALPL
RAGWLGESQLVLFVSLDERSLTLPLLHQAFEQLLRLQQEVLAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssN AAO18047.1 LssN Virulence TTSS locus Protein 3e-32 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pYV0063 YP_068472.1 sycN; type III secretion protein VFG0387 Protein 2e-51 100
pYV0063 YP_068472.1 sycN; type III secretion protein VFG0195 Protein 8e-26 48