Gene Information

Name : pYV0062 (pYV0062)
Accession : YP_068471.1
Strain :
Genome accession: NC_006153
Putative virulence/resistance : Virulence
Product : yscX; type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 43382 - 43750 bp
Length : 369 bp
Strand : -
Note : similar to Y. pestis YPCD1.36c

DNA sequence : 
GTGAGTCGCATAATAACTGCCCCCCATATTGGCATCGAAAAACTGTCGGCGATTAGCCTGGAAGAGCTATCCTGTGGCTT
GCCTGAACGTTATGCCTTGCCGCCTGATGGGCATCCAGTCGAACCACATTTAGAGCGCCTTTACCCTACAGCACAAAGCA
AGCGTAGCCTATGGGACTTTGCTTCTCCCGGCTATACATTTCATGGATTACATCGAGCTCAAGATTATCGGCGCGAACTG
GATACCTTGCAGTCACTGCTAACCACCAGTCAGTCCTCAGAGCTACAAGCTGCCGCGGCGCTGCTTAAATGCCAACAAGA
TGATGATCGGTTACTGCAAATAATCCTTAACCTGTTGCACAAAGTATGA

Protein sequence : 
MSRIITAPHIGIEKLSAISLEELSCGLPERYALPPDGHPVEPHLERLYPTAQSKRSLWDFASPGYTFHGLHRAQDYRREL
DTLQSLLTTSQSSELQAAAALLKCQQDDDRLLQIILNLLHKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssB AAO18048.1 LssB Virulence TTSS locus Protein 6e-18 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pYV0062 YP_068471.1 yscX; type III secretion protein VFG0386 Protein 8e-39 100
pYV0062 YP_068471.1 yscX; type III secretion protein VFG0196 Protein 5e-14 50