Gene Information

Name : pYV0041 (pYV0041)
Accession : YP_068450.1
Strain :
Genome accession: NC_006153
Putative virulence/resistance : Virulence
Product : yop targeted effector yopT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 29513 - 30481 bp
Length : 969 bp
Strand : +
Note : similar to Y. pestis YPCD1.20

DNA sequence : 
ATGAACAGTATTCACGGACACTACCATATTCAACTATCGAATTATTCTGCCGGTGAAAACCTTCAATCAGCTACCCTCAC
CGAAGGGGTGATTGGCGCACACCGAGTGAAAGTGGAAACAGCACTGTCACACTCAAACCTGCAGAAAAAGTTATCAGCCA
CCATAAAACATAACCAGTCAGGCCGTTCTATGCTGGATAGAAAGTTGACCAGCGACGGCAAAGCTAACCAACGCAGCAGC
TTTACCTTCAGTATGATTATGTATCGCATGATACATTTTGTACTCAGCACTCGTGTGCCCGCGGTGAGAGAGTCTGTTGC
AAATTACGGAGGTAACATCAATTTCAAGTTTGCTCAGACCAAAGGGGCTTTTCTTCATAAAATAATAAAACATTCAGACA
CTGCTAGCGGTGTCTGTGAGGCTTTATGTGCACATTGGATCAGGAGCCATGCACAAGGCCAAAGCTTATTTGACCAGCTC
TATGTTGGCGGGCGTAAGGGGAAATTCCAGATCGATACACTTTACTCAATTAAACAGTTGCAAATAGATGGTTGTAAAGC
AGACGTTGATCAAGATGAGGTAACACTAGATTGGTTCAAGAAAAATGGCATATCAGAACGTATGATTGAACGGCATTGCT
TACTGCGTCCAGTTGATGTTACTGGTACGACGGAATCAGAAGGGCTGGATCAATTATTAAACGCTATCCTTGATACTCAT
GGGATAGGTTACGGTTATAAAAAAATACATCTCTCAGGCCAAATGTCAGCCCACGCCATAGCGGCGTATGTCAACGAAAA
GAGTGGTGTTACTTTCTTCGATCCCAATTTCGGTGAATTCCACTTTTCTGATAAGGAAAAGTTCCGCAAATGGTTTACTA
ACTCATTCTGGGATAATTCTATGTATCATTATCCTCTGGGGGTGGGGCAGCGTTTTAGAGTGTTAACATTTGACTCCAAG
GAGGTTTAA

Protein sequence : 
MNSIHGHYHIQLSNYSAGENLQSATLTEGVIGAHRVKVETALSHSNLQKKLSATIKHNQSGRSMLDRKLTSDGKANQRSS
FTFSMIMYRMIHFVLSTRVPAVRESVANYGGNINFKFAQTKGAFLHKIIKHSDTASGVCEALCAHWIRSHAQGQSLFDQL
YVGGRKGKFQIDTLYSIKQLQIDGCKADVDQDEVTLDWFKKNGISERMIERHCLLRPVDVTGTTESEGLDQLLNAILDTH
GIGYGYKKIHLSGQMSAHAIAAYVNEKSGVTFFDPNFGEFHFSDKEKFRKWFTNSFWDNSMYHYPLGVGQRFRVLTFDSK
EV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18078.1 putative type III secreted effector LopT Not tested TTSS locus Protein 5e-78 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pYV0041 YP_068450.1 yop targeted effector yopT VFG0375 Protein 2e-151 99