|
Name : pYV0023 (pYV0023) Accession : YP_068434.1 Strain : Genome accession: NC_006153 Putative virulence/resistance : Unknown Product : transposase remnant Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 19220 - 19834 bp Length : 615 bp Strand : + Note : similar to Y. pestis YPCD1.04 DNA sequence : GTGTACCGGCTTTATCACCTCAGTAGCCTGGGCGTAAAACGCAGAAGGCGTCGGAAAGGGCTGGCAACAGAACGTCTGCC GCTGCTCCGTCCGGCGGCGCCCAATCTGACCTGGTCGATGGATTTCGTCATGGACGCATTGGCCACCGGTCGCAGGATCA AGTGCCTTACCTGCGTGGACGACTACACGAAGGAATGCCTGACGGTCACTGTTGCCTTTGGGATTTCAGGCGTGCAGGTC ACGCGTATTCTGGACAGCATTGCGCTGTTTCGCGGCTATCCGGCGACGATAAGAACTGATCAGGGCCCGGAATTTACCTG CCGCGCGCTCGATCAATGGGCCTTTGAGCATGGCGTGGAACTGCGACTTATCCAGCCCGGCAAGCCGACACAGAACGGAT TTATTGAGAGTTTTAACGGACGCTTTCGCGATGAATGCCTGAATGAGCACTGGTTCAGTGACGTCAGTCATGCCAGGAAA ACCATCAGTGAATGGCGTCAGGATTATAACGAGTGCCGCCCGCACTCTACGCTGAATTATCAGACGCCGTCTGAATTTGC GGCGGCCTGGAGAAAGGGTAATTCTGATAGTGAAGGATCCGACATTACTAAGTGA Protein sequence : MYRLYHLSSLGVKRRRRRKGLATERLPLLRPAAPNLTWSMDFVMDALATGRRIKCLTCVDDYTKECLTVTVAFGISGVQV TRILDSIALFRGYPATIRTDQGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDVSHARK TISEWRQDYNECRPHSTLNYQTPSEFAAAWRKGNSDSEGSDITK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAB46578.1 | IS1222-like transposase | Not tested | HPI | Protein | 4e-73 | 98 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 2e-55 | 67 |
| RS13 | AAP82958.1 | putative transposase | Not tested | PAPI-2 | Protein | 4e-42 | 62 |
