Gene Information

Name : pYV0019 (pYV0019)
Accession : YP_068430.1
Strain :
Genome accession: NC_006153
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 15757 - 16566 bp
Length : 810 bp
Strand : +
Note : similar to Y. pestis YPCD1.94

DNA sequence :
GTGGAATATCTGCTGGCGGCGTACCGTATCGGAGTACGCAGAGGGTGCAGGCTGATGATGCAGAGCCGCACTGTATACAA
CTATCGTAGCCATCGTGACGATCGGGCTATTACTCAGCGAATACGGGAAATTGCGGAGACGCGCATCCGTTATGGCTGTC
CGCGCATTCATATCCTGCTGCGGAGAGAAGGCTGGCTTGTTAACCATAAGAAAACGCACCGTATTTACTGTCTTGAGGGT
CTCAATCTACGTTCGAAACGTCCACGGCGGCATGTGACAGCGAAGCACAGGCACGCACGTCCAGAAGTGACCGCGTTAGA
GCAGTGCTGGAGCATGGATTTCGTTGCTGATAATCTGTTCAACGGGCGTCGGGTCAGGGCGCTAACTATAGTGGATAATT
TTAGTCGCGAATGTCTGGCGCTCGAGGTCGGTCAGGGGTTACGTGGAGATGATGTTGTGGCTGTCATGGACAGATTAAAA
CATTCGCTGGGGCGTATTCCACAAAGGCTGCAGACAGATAACGGCAGCGAATTCATCTCGAAGTCGATGGACCGATGGGC
GTATGAAAACAGGGTCACGATGGACTTTTCACGCCCCGGAAAGCCTACAGATAATGCCTTTATCGAGTCATTTAATGGCA
GTCTGAGGGATGAATGTCTGAACGTGCACGGGTTCCTTTCTCTGGAAGATGCTCAGGAGAAAATTGAACAATGGCGGCAA
GAATATAATCATTTTCGTCCGCATTCTTCGTTAAATAACCTGACTCCGGCAGAATTTGCCCGAAGTCATCAAAAAGGTCC
GGATCTCTGA

Protein sequence :
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEG
LNLRSKRPRRHVTAKHRHARPEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLALEVGQGLRGDDVVAVMDRLK
HSLGRIPQRLQTDNGSEFISKSMDRWAYENRVTMDFSRPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQ
EYNHFRPHSSLNNLTPAEFARSHQKGPDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-52 53
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 3e-38 48
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 6e-48 46
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 3e-47 42