|
Name : hemC (RT0453) Accession : YP_067411.1 Strain : Rickettsia typhi Wilmington Genome accession: NC_006142 Putative virulence/resistance : Unknown Product : porphobilinogen deaminase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0181 EC number : 2.5.1.61 Position : 582670 - 583569 bp Length : 900 bp Strand : + Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis DNA sequence : ATGATAAATTCTATCAGAATAGGCACAAGAAATAGTACACTTGCTTTAATACAGACTAATTTAGTTATTGCGCAAATAAA ACAATTTTTTCCTGATATTAATTGTGAAATAGTACCTATTATTACTAGCGGTGACTTAATTCAAAATAAACCATTATACG ATATAGGTGGTAAAGCTTTATTCTTAAAGGAAATAGAGCAAGCATTGCTTGATAAAAAAATTGACTTAGCTGTTCATTCT TTGAAAGATATACCTGGTAGAATACCTGTAGATCTAGTAATAGCTGCAGTTTTAGAGCGCGAAGATCCAAGAGATGTTTT GGTATGTTTAAATTATAAATCTATAGAAACACTTCCGCAAAATGCGGTAATAGGTAGCTCAGCAGTACGAAGAAAAGCAT TTATAAAAAAAATAAGACCTGATTTAAATATAAAAGTTTTTAGAGGCAATGTTGATTCAAGAATAAAAAAGCTAATGACA GGTGAAGTTGATGCAACAATTCTATCATATGCAGGTCTAAAAAGGCTTAATGCATTTAATAAGAAATATTGTCATCTTAT AGAGTATTCGCAGATATTGCCATGTGTAGGGCAGGGAGTCATTGCAGTCGAGATCAGAAAAGACGATAATGCTATGTTTA ATATATGTAATCAAATTAATCATATTCCAACCTTTGAATTAATAAAACCTGAAAGAGCATTTTTAGAACATCTAGATGCT AATTGCAGTACACCGATTGGTGCGTACTCACAATACCTAGATGCGTATAATATACAAACAGATTTTATGCTTGGTAAGCT TGATTGTAATAAAATAATATTCCAAACTGAAATTACCAATATTAATACCTCAAGAGAATGTGGCATCAAAGCTGCTAAAA TGATGTTGGCACAACAATAA Protein sequence : MINSIRIGTRNSTLALIQTNLVIAQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFLKEIEQALLDKKIDLAVHS LKDIPGRIPVDLVIAAVLEREDPRDVLVCLNYKSIETLPQNAVIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMT GEVDATILSYAGLKRLNAFNKKYCHLIEYSQILPCVGQGVIAVEIRKDDNAMFNICNQINHIPTFELIKPERAFLEHLDA NCSTPIGAYSQYLDAYNIQTDFMLGKLDCNKIIFQTEITNINTSRECGIKAAKMMLAQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00331 | YP_008211657.1 | Porphobilinogen deaminase | Not tested | AbaR26 | Protein | 5e-45 | 41 |
| BJAB07104_00327 | YP_008207792.1 | Porphobilinogen deaminase | Not tested | AbaR25 | Protein | 5e-45 | 41 |
